Rheinheimera sp. D18: E0Z06_11350
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Entry
E0Z06_11350 CDS
T05923
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rhh
Rheinheimera sp. D18
Pathway
rhh03030
DNA replication
rhh03430
Mismatch repair
rhh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E0Z06_11350
03430 Mismatch repair
E0Z06_11350
03440 Homologous recombination
E0Z06_11350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhh03032
]
E0Z06_11350
03400 DNA repair and recombination proteins [BR:
rhh03400
]
E0Z06_11350
Enzymes [BR:
rhh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E0Z06_11350
DNA replication proteins [BR:
rhh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
E0Z06_11350
DNA repair and recombination proteins [BR:
rhh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
E0Z06_11350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_tau_5
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
AAA_16
AAA_5
AAA_14
PIF1
AAA_18
AAA_30
ResIII
TIP49
AAA_2
AAA_7
AAA_19
TsaE
HTH_55
AAA_assoc_2
nSTAND3
ABC_tran
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
QBL10067
LinkDB
All DBs
Position
complement(2399947..2402079)
Genome browser
AA seq
710 aa
AA seq
DB search
MSYQVLARKWRPQHFGQLVGQEHVKNALGNALNNNRLHHAYLFTGTRGVGKTTIARIFAK
SLNCEQGITATPCGQCSACLEIDAGNFVDLMEIDAASRTKVEDTRDLLDNVQYAPSRGRF
KVYLIDEVHMLSKHSFNALLKTLEEPPPHVKFLLATTDPQKLPITVLSRCLQFNLLALSP
QQIEQHLAFILGEEQIPNEPEALTMLARAAKGSLRDSLSLTDQAIAQSNANITLDTVRTM
LGFLDQSWAQLLLQAILNQDVQQLQTQLAALVQQQSHFSQVLDDMLSLLHLTALTQFSAS
AASFSAQQEYVQQLADTLAPAQVQLYYQLLISGKKELPYAPDPLTGLEMALLRAMAFIPE
AQAPNTAAVSRPVIAAVSRTVKSAAHADAPKQQIPEGNAPVEAAIPLQALSIPEPAVEPT
DVEVTEVAAEASVGIAPGIAGIMARRGVHVTAAPPEKKPERPQALASVPEAIVPTPAVQV
SVAQPQAPVATATTQNLAKVSANSKLPISPATAVVNSTVEPDFDDNYDTSDSDIPQYDAA
SADALWQHYEQDMQQSVVATANIAAPTMEQFDGSINEQNFSIRFAAQVDAWAARVETLDT
GGLSRLFLLNSAMQLNGNTLKLVVAQSQQHLDSDNFRVKLQQVLEHSFNQPLTVEISYQA
EVPTSPLSIQQKIVQERLVYVTSLLQQDENVQQLQQMFDAQLLLDTILVN
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggtattagcgcgtaagtggcgtccacagcattttggccaactcgttggg
caggagcatgtaaaaaacgcgcttggtaatgcccttaataataatcggctacaccacgcg
tatttatttaccggtactaggggtgtcggtaaaaccacgatcgcgcgtatttttgccaaa
agtttaaattgtgagcaaggtattaccgctaccccttgtggccagtgtagtgcttgttta
gaaatagacgctggtaattttgtcgatttaatggaaattgacgccgcatcgcgcaccaag
gttgaagacacccgcgatttacttgataacgtacaatatgcgccaagccgtggtcggttt
aaagtgtatcttattgatgaagtacacatgctgtcgaagcatagctttaatgcattatta
aaaacgttagaagagccgccaccgcacgtaaagtttttgctggcaactacggatccgcaa
aagctacctattaccgtattatcgcgctgtttgcagtttaacttacttgcattaagccct
cagcaaatagagcagcatttagcctttattcttggcgaagaacaaattccaaacgagcct
gaagcacttactatgttagcgcgtgcggcaaaaggcagtttgcgtgactcgttaagctta
accgatcaggccattgcgcaaagtaacgctaatattacgttagacaccgtgcgtactatg
ttggggtttcttgatcaaagctgggcgcaactattgttgcaagcaatactgaaccaagat
gtacagcagctgcaaactcagttggcggccttggtgcagcagcaaagccatttttcgcaa
gtattagacgacatgctgtcgttattgcatttaaccgcgttaacgcagttcagcgctagt
gccgcgagtttctccgcgcaacaggaatatgttcagcaattggctgataccctagcaccg
gctcaggtgcagctatattaccaattgttaattagtggcaaaaaagagctaccttatgca
ccagacccattaactgggctggaaatggcgctattacgtgccatggcatttattcctgaa
gctcaagcacccaatacggcagcggttagtcgaccagttatagccgcggttagtagaacc
gttaagtcagcagcgcacgctgatgcgccaaagcagcaaatacccgaaggtaatgctccg
gttgaggcagcgataccactgcaagcgctaagcattcctgaaccagcagtcgaacctact
gacgttgaagttactgaggttgcagccgaggcctcggttggtattgctcctggaattgcc
gggattatggcccggcgcggggtgcacgttacggcagcaccaccggaaaaaaagcctgag
cgcccccaggcgcttgcttctgtgccagaggcgatagttccaacaccggcggtgcaggta
tctgtagcgcagccacaggcgccggttgccactgcaacgacgcaaaatttagctaaggtc
agtgctaatagcaaattgccaattagccccgcaacagcggtcgttaatagcacagtcgag
ccagactttgacgataactatgacactagcgacagcgatattccgcaatatgatgctgcc
tcagccgatgcattatggcagcattatgaacaagatatgcagcagtctgttgtggccacg
gcaaatattgctgcgccgacgatggagcaatttgacggcagcattaatgaacagaatttc
tctattcgctttgccgcgcaagtagatgcttgggctgcgcgagtagaaacgcttgatacc
ggtggccttagtcgcttatttttgcttaattcagcaatgcagctaaacggtaatacatta
aagttggtagttgcgcaaagtcagcagcatttagatagcgataattttcgggtaaagctg
cagcaagtgttagagcatagttttaatcagccattaacggttgagataagttatcaagct
gaggtgccaactagcccattgagtattcagcaaaaaattgtgcaagagcgtttggtctac
gtaacaagcttattacagcaagacgaaaatgtgcagcagttacaacagatgtttgacgcg
cagttattgctcgataccattttagtaaactga
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