Rheinheimera sp. D18: E0Z06_11445
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Entry
E0Z06_11445 CDS
T05923
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rhh
Rheinheimera sp. D18
Pathway
rhh03030
DNA replication
rhh03430
Mismatch repair
rhh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E0Z06_11445
03430 Mismatch repair
E0Z06_11445
03440 Homologous recombination
E0Z06_11445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhh03032
]
E0Z06_11445
03400 DNA repair and recombination proteins [BR:
rhh03400
]
E0Z06_11445
Enzymes [BR:
rhh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E0Z06_11445
DNA replication proteins [BR:
rhh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
E0Z06_11445
DNA repair and recombination proteins [BR:
rhh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
E0Z06_11445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QBL10083
LinkDB
All DBs
Position
complement(2424697..2428167)
Genome browser
AA seq
1156 aa
AA seq
DB search
MREPSFIHLRVHSDFSMVDGVAKIKPIVKAAQNLAMPALALTDQMNFCGLVRFYSAAHGA
GIKPIIGIDCYVQHALLGNECSRILLLAADNTGYQNLSQLISKAYLRGHVDGKPQIEHDW
LAEFSAGVIILSGGKDGVLGKALLKENNQSINQLLEFYQLYFPDRFYLEVIRTGRPDEEH
YIQKAVTLAEQYNLPLVATNEVVFLKPEDFPAHEIRVAIHDGFTLDDKRRPKNYTEQQYL
KSEAEMQLLFVDLPEALENSVEIAKRCNVTIRLGEYFLPAFPTGGMSDADFLVMKSREGL
EQRLIKLFPDATVRATNRVAYDERLQIELDVINQMGFPGYFLVVMEFIQWSKDNDIPVGP
GRGSGAGSLVAYALSITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDRRDEVIEHVSD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLIPMTPGMTLDQAFKEEPR
LPELYAQDQEVKDLIDMARQLEGVTRNAGKHAGGVVIAPTKITDFSPLYCDNEGNNPVTQ
FDKNDVEYAGLVKFDFLGLRTLTILQWAVNMTNTRLEKEGRELIDINAISLVDRKCFDLL
QKADTTAVFQLESRGMKDLIRRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKRGREA
ISYPDATWQHESLKPILEPTYGIILYQEQVMQIAQVLSGYSLGGADLLRRAMGKKNAEEM
AKQRDAFQDGAAKNNIDPELAIKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWMKTHYPA
EFMAAVMSADMDNTDKIVTLVDECERMKLKLIPPDVNAGVHKFTVNEQGHIVYGIGAIKG
VGEGPIEAIIEARTKHGVFTDLFDFCAKVDLKKLNRRVIDKLILSGAMDQLGPHRAALSA
TLEEAMKAADQHAKAQAVGQDDLFGLLSPEPENAAAAFKQVAPWPDEVWLEGERETLGLY
LTGHPINRYLDEIPRYVHCRLVDLQPTRKDQSITVAGLVVSVRIMINKKGRRWAIVTLDD
KSARLDVRFFPDMLEMFELQLQKDHILVITGQVSFDDFNGGLTMTGRDVCEITSVREKSL
RSLNITVQSSNIDHNYLQRLQQVLSEFKAGTVPVKLRYQRQEGEIMLQLGTTWWITPADA
LLHQLKQLATIELEFN
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgagagagcctagctttattcatttgcgcgtacacagcgacttttcaatggtcgatggc
gttgccaaaataaaacctattgttaaagccgcgcaaaatttagccatgccagcgttggcg
ctaactgatcaaatgaatttttgcggcttagtgcgcttttacagtgctgcacatggcgcg
ggtattaagccaataattggtatcgattgttacgtgcagcatgcattactcggtaatgag
tgcagccgtatactgctacttgccgccgataataccggttatcaaaaccttagccagctt
atttctaaagcctatttacgtggccatgttgatggcaaaccacaaattgagcatgactgg
ctcgcagagttttctgccggcgttattattttgtctggtggtaaagatggcgtattaggc
aaggcgctattaaaagaaaataatcaaagtattaatcagttgctcgagttctatcagctg
tattttcctgatcggttttacctggaagttattcgtaccggtaggcctgatgaagagcac
tacattcaaaaagccgtaacgctggccgagcaatacaatttacccttagttgcgactaac
gaggtggtatttttaaaaccagaagatttccctgcgcatgaaatacgcgtggcaattcat
gatggttttaccctagacgataaacgtcggccaaaaaattatactgagcagcagtattta
aaatctgaagcagaaatgcagctgttatttgttgacttaccggaagcgttggaaaattcg
gttgaaattgccaagcgttgtaacgtaaccattcgtttgggtgagtatttcttaccggca
tttcctactggcggcatgagcgacgccgattttttggtaatgaaatcacgcgaaggttta
gagcagcgtttaatcaagctatttcctgatgctaccgtgcgcgcaactaaccgggttgct
tatgatgaacggttacaaattgaattagatgttattaatcaaatggggtttcccggctac
ttcctagtcgtgatggaatttattcagtggagtaaagataacgatattccagttggcccc
ggccgaggttctggcgccggctcactagtggcttatgcactgagtattactgacttagac
ccgttagaatttgatttactgttcgagcgttttttaaaccctgaacgggtatctatgcct
gattttgacgtcgacttttgtatggaccggcgcgatgaagtaatagagcacgtgtcggat
atgtacggccgtgatgcggtgtcgcaaattattacctttggtactatggcggctaaagcc
gttattcgcgacgtggggcgagtattaggccacccgtatggttttgttgaccgtatttct
aagctgatcccgatgacaccgggtatgacgttagatcaagcctttaaagaagagccgcgc
ttgcccgagctatatgctcaagatcaagaagtaaaagatcttattgacatggcgcgccag
cttgaaggtgttacccgtaacgccggtaagcatgcaggtggggtagtaatagctcccact
aagatcaccgacttttcaccgttatactgtgacaacgaaggtaataacccagttacgcag
tttgataaaaacgacgtcgaatatgcgggtttagttaagttcgactttcttggcttgcgc
acactgaccattttgcagtgggcagttaatatgaccaatacgcggctagaaaaagaaggt
cgtgaattaattgatattaacgctatttctttagtcgatagaaagtgctttgatttactg
caaaaggccgatactaccgcggtattccagcttgaatcccgcggtatgaaagacttaatt
cgccgcctacagccagactgttttgaagatatgattgccctagtggcgttgtttcgccca
gggccattgcaatcaggcatggtagataactttattgaccgcaaacgtggacgtgaagct
atatcttatcctgatgcgacatggcagcacgaatcactaaaacctattttagaaccgaca
tacggcattattctgtatcaagagcaggtaatgcaaattgcccaagtcttatcgggctac
tcgttaggtggcgctgacttactgcgccgagccatgggtaagaaaaatgccgaggaaatg
gccaagcaacgtgatgcgtttcaagatggcgcagccaaaaacaatattgatccagaacta
gcgattaaaatttttgacttagttgagaaatttgctggttatggttttaacaaatcacac
tctgcggcatacgcactcgtatcctatcaaacgctttggatgaaaacgcattatccggca
gagtttatggctgcggtaatgtcagctgatatggataacaccgacaagatagtcacgctg
gtggatgaatgcgaacggatgaaactaaagcttatcccgcctgacgtaaacgccggtgtg
cataagtttaccgtaaatgagcaaggccacattgtttatggtattggcgcgattaaaggc
gtgggtgaaggcccaatagaagccattattgaagcacgtactaaacacggtgtatttacc
gatttatttgatttttgtgccaaggttgatttaaagaaactgaatcggcgagtaatagat
aaacttattttatccggtgccatggaccaactcggcccacatcgcgctgcgctatcagca
acgctagaagaggcaatgaaagcagcggatcaacatgctaaagcgcaagcagtagggcaa
gacgacttatttggcttattaagcccagagccagaaaacgccgcagctgcctttaagcag
gtagcgccttggcctgatgaagtatggttagagggtgagcgagaaaccttaggtttatat
ttaacggggcacccgataaaccgttatctagacgaaataccgcgttatgtacattgtcgc
ttagtagacttacaaccgaccagaaaagatcaaagtattaccgtggcaggtttggtggtg
tcggttagaataatgattaataaaaaaggtcggcgctgggccattgttacacttgacgat
aaatccgctcgattagatgtacgttttttccccgatatgctagaaatgtttgagttacag
ctacaaaaagaccatattttggttataactggacaggtcagctttgatgattttaacggt
ggccttacaatgaccggccgcgatgtatgcgagatcacttcggtacgagaaaagtctcta
cgatctctgaatatcactgtacaatcgtcgaatatagaccacaattacctgcaaagattg
cagcaggtattaagcgagtttaaggctggcactgtgccggttaagctgcgttatcaacgc
caggaaggcgaaattatgttacagctagggacaacatggtggataacgccagccgatgct
ttgttgcaccagttaaaacaactggcaacaatagaactagaatttaattaa
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