Rheinheimera sp. D18: E0Z06_11590
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Entry
E0Z06_11590 CDS
T05923
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
rhh
Rheinheimera sp. D18
Pathway
rhh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
E0Z06_11590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhh03400
]
E0Z06_11590
Enzymes [BR:
rhh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E0Z06_11590
DNA repair and recombination proteins [BR:
rhh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E0Z06_11590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
WHD_PriA
FtrD-like
DAP3
Motif
Other DBs
NCBI-ProteinID:
QBL10937
LinkDB
All DBs
Position
2457891..2460050
Genome browser
AA seq
719 aa
AA seq
DB search
MALPVPLRQHFDYLINADPKPQVGCRVLVPFGNRKLIGIIWQIAPTDSFDASKLKAVLSL
LDTSPVLPPLLCQLLSFAADYYHYPLGEVLISALPALLREGRNLNDYQPKAYQLTDTGKL
LNITALKRAPKQHALWQALQAHQLTESVLLQQHSRSTLKQLLEKQLVEELIVAPIPFTPP
ETEATGLKLTPSQALAVTAVNHASGRFERLLLEGVTGSGKTEVYLQAIASLLLKQQQVLV
IVPEIGLTPQTLARFQARFNVPVLCWHSALTDNERLHCWLQASTGAAAIIIGTRSALFLP
FWQLGLIIIDEEHDQSLKQQDGFRYHARDLAIKRAALQHCPILLGSATPSLESLHNALSK
RFIHLPLPDRAAGQALPSFELVDLKQQVLQFGLASQTLAQIKQQLTLGLQVMLFLNRRGF
APALSCQECGWLTECQRCSAFTTYHKQSRQLVCHHCGASKAIPRQCGGCGSTQLKPLGQG
TEQLEENLQLLFPDIAITRLDRDSTRRKGALHQALEDIHQTGARLIVGTQMLAKGHHFPN
VSLVVIVDVDGALYSSDFRAPEQLAQLLTQVAGRAGRGSSGGKVLLQTQYPEHALLQDII
QNGYASFARSALAEREQTRLPPFQHLVLFSAEAHQSIDCQQWLQQVTDFMRQYPALQLLG
PIPAPLERRAGKYRWQLQLYSAGRNTVHQALDQLLLQIASWPLSRKVKWQLDVDPTDLT
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
gtggcactgccggtgccactgaggcaacattttgactatcttatcaatgccgacccaaaa
ccccaggtgggttgccgagtattagtcccttttggcaaccgtaaactgatcggcattatt
tggcaaattgcgccaactgatagctttgatgccagtaaactaaaagccgtgcttagcttg
ctcgacaccagcccagtacttccgccattactttgccaattgctaagtttcgctgctgac
tattaccattatccattaggtgaagtgctaattagtgcgctacccgcgttgttacgtgaa
ggccgaaatttaaatgactatcaacccaaagcctatcagttaaccgatacaggtaagctg
ctcaacatcacggcattaaagcgcgcaccgaaacaacacgcgctatggcaagcattacag
gcgcatcagctaactgaatcggtattattacagcagcatagccgcagcacgttaaagcaa
ttactagaaaagcagttagtcgaagagttaattgtggcccccatcccctttacaccacca
gagactgaagctacggggcttaaattaacgccttcgcaagcactagcggtaactgccgtt
aatcacgccagcggccgttttgagcgattactattagaaggcgttactggctcgggtaaa
acggaagtgtacttgcaagccattgccagcttattgctaaagcaacagcaagtattagtc
atagtgccagagattggtttaacgccacaaaccctagcccgttttcaagcgcgctttaac
gtgccagtactttgttggcattcagcccttaccgacaacgaacgcttacattgctggtta
caagccagcaccggcgctgccgccattattattggcacgcgctcggcattatttttacca
ttttggcagcttggtctgattattatcgatgaagaacatgaccaatcgctaaaacaacag
gatggctttcgttatcatgctcgcgatttagcgattaagcgcgcggcactgcaacattgt
cctattttattaggctcggcaacaccgagcttagaaagcctacacaatgcactaagcaag
cgctttattcatctgccgctacccgaccgcgccgctggccaggccttacccagctttgag
ctggttgatttaaagcagcaagtactacaatttggtttagctagtcaaaccctagcgcaa
atcaagcaacagctaactctcggcttacaagtaatgttatttttaaaccggcgcggcttt
gccccagcactcagttgccaagaatgcggctggttaaccgaatgtcagcgctgcagtgct
tttactacctatcataaacaaagccgccagctggtatgtcaccattgcggcgccagcaaa
gctattccacgccagtgtggcggttgtggcagcactcaacttaaaccgctgggccaaggc
actgaacagcttgaagaaaatttacaactattgtttcccgacattgccatcacccggctt
gatcgcgacagcaccagacgtaaaggtgcattacatcaggcattagaagatattcaccaa
actggtgcacggctgattgttggtacgcaaatgctggctaaaggacatcactttccaaat
gtgagtttagtggtcatcgttgacgtagatggtgcattgtatagcagcgattttcgcgca
ccagaacaactggcgcaactgcttactcaggttgccggccgcgcgggccgtggcagtagc
ggtggtaaagtgttattgcaaacgcagtaccccgaacatgccctgctacaagatattatt
caaaacggttacgcttcttttgctcgcagcgctttggctgaacgtgagcaaactcggcta
cccccgtttcaacacttagtgctatttagcgcagaagcacatcaatccatcgattgccaa
caatggttacaacaggtgaccgactttatgcggcaatatccggcactgcaattgctgggg
cctattcctgcgccactggaacgcagagccggtaaatatcgctggcagctgcaactttat
agcgcaggtagaaacacagtgcatcaagcgttagaccagctattactgcaaattgccagt
tggccgctaagccgaaaagtgaaatggcaactcgacgtagacccaactgatctgacctga
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