Rheinheimera sp. D18: E0Z06_12610
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Entry
E0Z06_12610 CDS
T05923
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
rhh
Rheinheimera sp. D18
Pathway
rhh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rhh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
E0Z06_12610 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhh03400
]
E0Z06_12610 (xseA)
Enzymes [BR:
rhh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
E0Z06_12610 (xseA)
DNA repair and recombination proteins [BR:
rhh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
E0Z06_12610 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Fe-ADH
RMI2
RecJ_OB
Bunya_nucleocap
DHQ_synthase
CENP-K
Motif
Other DBs
NCBI-ProteinID:
QBL10306
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All DBs
Position
2660949..2662286
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AA seq
445 aa
AA seq
DB search
MQNPDIYTVSRLNSEVRLTLELQFQTLWLQGEISNFVAAASGHWYFSLKDSAAQVKCAMF
KQANRNSSFRPQNGQQVLIRARISVYEPRGEYQLLAEFIESAGAGLLKQQFEQLKAKLLS
EGLFDLSGKKALPAHVQRVGVITSPTGAAIRDIVTVLQRRAPGIEVIIYPSQVQGETAAA
QLRQMLSTAIRRNEVDVLIIGRGGGSLEDLWCFNDETLCRAIADCAMPIVSAVGHEIDFA
LTDFVADMRAATPSAAAELVSPDQSHLLERVQRLRNALIQAQRARMQQLTPKLVNLSERL
LALHPKRRLQQQQQRLDELQLRLTSNVKRVLQSQLQQQQYLDKSLRQLSPLKAITAQQQS
IADLARRLTSAQQLQLKQHKQQLAQLSLQLNTVSPLATLARGYSITFDNTKQVLTSTDSL
TIGDSVSVRLAKGEFAAKVTKLTTG
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaccccgatatttataccgtttctcgcttaaatagcgaagtgcgcttaactctt
gagctacagtttcaaaccctgtggttgcaaggtgaaatatctaattttgttgctgcagct
agcggccattggtatttttctttaaaagacagcgccgcacaagttaaatgcgcgatgttt
aaacaggctaaccgcaatagcagctttcggccgcaaaatggccaacaggtattaattcgc
gcccgcattagtgtgtacgagccgcgtggtgaatatcagttactggctgaatttattgaa
agcgccggtgccggtttactaaaacagcagttcgagcaactaaaagctaagctgcttagc
gaaggtttgttcgatctgtctggcaaaaaagcgcttcccgcccacgtgcagcgcgtgggt
gttattacctcgccgacgggtgccgccatacgcgatattgttacggtattgcagcgccgc
gcgccgggcatcgaagttattatttatccatctcaagtacaaggcgaaaccgctgcagcg
cagcttaggcagatgctaagcaccgccatacggcgcaatgaagtcgatgtacttattatt
ggccgcggtggtggctcgctagaagacttatggtgctttaatgatgaaacgctgtgccgg
gctatcgccgactgcgctatgccaatagtaagcgccgtaggccatgaaatagattttgcc
ctaaccgattttgttgccgacatgcgcgcagctacaccatcggcagcggcggagttagta
tcgccagatcaaagccatttgttagaacgcgtacagcgcttacgtaatgcgcttattcaa
gcccagcgcgcgcgtatgcagcagctaacccccaagttagtgaatttaagcgagcgctta
ttagcgctgcatccaaaacgcaggctacaacaacaacagcaacgcttagatgaattacag
ctacggctaaccagcaatgtaaaacgcgtgctgcaaagccagttacaacaacagcagtat
cttgataaaagcctacgccaactatcaccattaaaagccataacagcacaacaacaaagc
attgccgatttagctcggcggctcactagcgcgcaacagttacaactaaaacagcataaa
cagcaactagcccagctaagcctacaactaaataccgtaagtccgctagctacactcgcg
cgtggttacagcatcacgtttgacaacaccaaacaggtacttacctcaaccgacagctta
acaataggcgacagcgtgtcggtgcggctggccaagggtgaatttgccgctaaagtaacc
aagcttacaacgggttaa
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