Rheinheimera sp. D18: E0Z06_13805
Help
Entry
E0Z06_13805 CDS
T05923
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
rhh
Rheinheimera sp. D18
Brite
KEGG Orthology (KO) [BR:
rhh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhh03400
]
E0Z06_13805
DNA repair and recombination proteins [BR:
rhh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
E0Z06_13805
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
SLFN-g3_helicase
AAA_30
AAA_22
DZR
AAA
AAA_16
DUF7577
zf-tcix
T1R_D3-like
ERCC3_RAD25_C
SNF2-rel_dom
Prot_inhib_II
Motif
Other DBs
NCBI-ProteinID:
QBL10524
LinkDB
All DBs
Position
2958753..2960570
Genome browser
AA seq
605 aa
AA seq
DB search
MNAPFKLRPYQQEAVDATVKHFRKSDESAVIVLPTGAGKSLVIAELARLARRKILVLAHV
KELVEQNHAKYQSYGLVGGIFSAGLNRKEHRYQVTFASVQSVSASLAQFKDEYSLVIIDE
CHRVSDDETSQYQRIIAQLRQQNVGLKVLGLTATPYRLGTGWIYRYHYRGFVRSCHSQSD
EQNKPFVHCINELSLIYMINKGYLTKPKLIDAAVAQYDFSALTQNRFGEYADKDVNQLLS
KHPRVTQAIIEQVTELAVKRQAVMIFAATVDHAKEIIGYLPPEHTALITGATEQRERDKL
IQRFKQRQLKYLVNVSVLTTGFDAPHVDFIAILRPTQSVSLYQQIVGRGLRLSEGKQNCL
VIDYAGNNINLYHPEVGEKKPNADTEPVQVLCPGCGFANIFWGKTNGNGQVIEHYGRRCQ
GLLETDEDNELTASNPRPEQCDYRFRFKACPHCGSENDIAARNCHQCKNAIIDPDDQLRD
ALKLKDAMVIRCAGISLNTEATIDNTLSNHKSRLKITYHGEDGEELSEWFDFSKPAQRNI
FNKLFGRRLANSQVPQEFSQLEQVLAIKTLLPVPDFVIARKKKRYWQVQERIFDYQGIYR
KADKT
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcgccttttaaactgcggccttaccaacaggaagccgttgatgccacggtaaag
cactttcgtaaatcagatgagtctgcggtaatagtgttgccgaccggtgccggtaaaagt
ttagttattgccgaactggcgcgtcttgcacggcgtaaaattctggtactggctcacgta
aaagagctggttgagcagaatcatgctaaataccaaagttatggcttagtggggggtatt
ttctctgcggggttaaaccgtaaagaacaccgttatcaggtgacgtttgctagcgtgcag
tctgtgtcggcaagtttagcgcagtttaaagatgaatactctttagttattattgatgag
tgtcatcgagtcagtgacgatgagaccagccagtatcagcgtattattgcacagctgcgc
cagcaaaatgtcggccttaaagtgctggggcttaccgccacaccttatcgcttaggcacg
ggttggatctaccgttatcattatcgtggctttgtgcgcagctgccatagccaaagtgac
gagcagaacaaaccttttgtgcactgtattaatgagctgtctctgatttatatgattaat
aaaggctatttaactaagcctaagttaattgacgccgcggtggcgcaatatgatttctca
gcgctaacgcaaaaccgctttggcgagtacgctgacaaggacgtgaaccagctgttaagc
aagcacccacgtgttacccaagccattattgagcaagtgacagagctagccgttaaacgc
caagcagtgatgatttttgccgcaacagtagatcatgctaaggagatcatcggctatttg
ccaccagaacacaccgcattaattaccggcgccactgagcagcgtgagcgggataagctg
atccagcgctttaaacagcgccagttaaagtatttagttaatgtgtctgtacttacaacg
gggtttgatgcgccccatgtcgattttattgctattttgcgccctactcagtcagtgagt
ttgtatcagcaaattgtaggccgtggtttacgtttaagcgaaggcaaacaaaactgccta
gttattgattatgcggggaataatattaatttatatcatcctgaggtgggtgaaaaaaaa
ccaaacgccgacactgagccggtgcaggtattatgcccaggctgtggctttgccaatata
ttttggggcaaaacaaacggtaacggccaagtaattgaacactatggccgccgttgtcag
gggctattagaaactgatgaagataacgagcttacagcgtctaacccgcgccctgagcaa
tgcgattaccgctttcgttttaaagcatgcccgcactgcggcagcgagaatgatattgcc
gcgcgtaattgccatcagtgtaaaaacgccattattgaccccgatgaccagctacgtgat
gcactaaaactaaaagacgctatggtaattcgctgtgctggcattagtttaaataccgaa
gctacgatagataacacgcttagcaaccataaaagtaggttaaaaattacctatcacggt
gaagacggcgaagaacttagcgagtggtttgatttcagtaaaccggcacagcgtaatatc
ttcaataagttatttggtcggcgcttagccaatagccaagtaccacaagaattcagccaa
ctggaacaagtactagcaataaaaaccttattgccagtacctgatttcgttattgcccgc
aaaaagaagcgttattggcaggtacaagaacgaatttttgattatcaaggtatctatcgt
aaagcggataagacgtga
DBGET
integrated database retrieval system
