Rheinheimera sp. D18: E0Z06_14295
Help
Entry
E0Z06_14295 CDS
T05923
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
rhh
Rheinheimera sp. D18
Brite
KEGG Orthology (KO) [BR:
rhh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhh03016
]
E0Z06_14295 (trmA)
Enzymes [BR:
rhh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
E0Z06_14295 (trmA)
Transfer RNA biogenesis [BR:
rhh03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
E0Z06_14295 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
MTS
Methyltransf_25
Methyltransf_15
Methyltransf_31
Methyltransf_4
Methyltransf_12
Methyltransf_11
TRM5-TYW2_MTfase
Cons_hypoth95
DREV
PrmA
Methyltransf_23
RrnaAD
Motif
Other DBs
NCBI-ProteinID:
QBL10601
UniProt:
A0A4P6VTV1
LinkDB
All DBs
Position
3050488..3051576
Genome browser
AA seq
362 aa
AA seq
DB search
MSVGQVFPEQYLTQLTDKVTRVQQLLANFNAPNAEVFASEPTHYRLRAEFRIWHNGDDIY
HAMFDSESREKVRIDHFPVACRAIADFMPVLLKHIQFNHELRYKLYQVDYLATLSGELLV
SLIYKRPLTNSWLEQATKLTEALASEYNVKFIGRSRKQKLMVSDDYVTEQFELDNTQLKY
QQVEGSFTQPNGEVNRHMLGWAKNIANKLSGDLLELYCGNGNFSIALAPCFDNVVATEIS
RTSIKSAQYNIALNQVTNLQVVQMSAEDVSAALQQGSTLKQLDLTNMQLNTVLVDPPRAG
LDAGTEQLVSRFNDIIYISCNPDTLAQNLQALSSTHDIIQLAVFDQFPYTHHIETGVWLR
KR
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtaggtcaggtttttcccgagcagtatttaactcaattaacagataaggtaact
cgtgtacaacagttgcttgccaactttaatgcacctaacgctgaagtgtttgcatctgag
cctacacattaccggctaagagcggaatttaggatttggcataacggtgatgatatttac
cacgccatgtttgattcagaaagccgtgagaaagtgcgcattgatcattttcctgtcgcc
tgtcgtgctattgctgattttatgccggtgttattaaaacatattcaatttaatcatgaa
ctacgttacaagctttaccaggttgactatttggcaacactgtctggcgagttgctggtg
tctctaatttataagcggccattaaccaatagctggcttgaacaagcaactaaattaacc
gaagcactagctagcgaatacaacgttaagtttattggccggtcacgcaaacaaaagctg
atggttagtgatgattatgtcactgaacagtttgaattagataatacacaactgaaatat
caacaggtggaaggcagcttcactcagccaaacggcgaggttaatcgccatatgctcggt
tgggcaaaaaatattgctaataaactgtccggcgacttacttgagctgtattgcggcaat
ggcaacttctccatcgcactagcaccatgcttcgacaatgtcgtcgctaccgaaatttct
cgcacctctattaaatcagcacaatacaacatagcgctaaaccaggttactaatttgcaa
gtggtgcaaatgtctgcggaagatgtgtcggccgcattacagcaaggcagcaccttaaaa
cagctcgatttaacgaacatgcagcttaatactgtgctagttgacccgccacgcgcggga
cttgatgcaggtaccgaacagttagttagccgctttaacgatattatttatatttcgtgt
aatcccgataccttagcgcaaaacttacaagcgttaagcagcacacatgacattatacag
ttagcggtattcgaccagtttccttatacccaccatattgaaaccggtgtttggcttaga
aagcgttaa
DBGET
integrated database retrieval system
