Rheinheimera sp. D18: E0Z06_14510
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Entry
E0Z06_14510 CDS
T05923
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
rhh
Rheinheimera sp. D18
Brite
KEGG Orthology (KO) [BR:
rhh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhh03400
]
E0Z06_14510 (sbcD)
DNA repair and recombination proteins [BR:
rhh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E0Z06_14510 (sbcD)
Archaeal homologous recombinant proteins
E0Z06_14510 (sbcD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
VPS51_Exo84_N
7tm_7
OHCU_decarbox
Atypical_Card
Motif
Other DBs
NCBI-ProteinID:
QBL10642
UniProt:
A0A4P6VZT6
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Position
3091098..3092315
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AA seq
405 aa
AA seq
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MRILHTSDWHLGQHFIGRSRADEHHAFLHWLVTQVKAENIDVIIVAGDIFDTATPPSYAR
ALYNQFIVELQSCQCQLIILGGNHDASAVLNESRTLLQHLNTHVFASSSSELNQQLLVLH
NKQQQPAALLCAVPFLRARDLLQSQAGQSATEKQSSLQQAIAQHYQQLFALAQRYNSQHQ
LQLPIVMTGHLTTLGVTQSESVRDIYIGSLEAFPADAFPPADYIALGHIHQSQQIKANTD
IRYSGSPIALSFDEANQQKQAWLIEFSSNNKTVSSLAIPCFQPLISIKTTLDSIKPNVQQ
ALNSLEKNKVLWLELVITETDAYLTDLQQRVEAELEGLPVELLRLRRQRNEQLGGLIDAA
QTSLAELTPSQVWQARLSSESLTDQQQQQLTNLHTQVLAKVQETP
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgcgtattttacatacctctgactggcatctaggccagcattttattggtcgcagcagg
gctgacgaacatcacgcttttttacattggttagttacacaggtaaaagcagagaatatt
gatgtgattattgttgccggtgatatttttgataccgcaaccccgcctagttacgctcgc
gcgctatataatcaatttattgtcgaattacaaagctgtcagtgccaactcattatctta
ggtggcaaccacgatgccagtgcggtactaaatgaaagtagaaccctgctacaacaccta
aatacccacgtatttgccagcagcagctcagaacttaatcagcaattactggtactacat
aataagcaacagcaaccggcagccttattgtgtgccgtaccttttttacgtgcccgtgat
ttactgcaaagccaagcagggcaaagcgcaacagaaaaacagagtagcttacagcaggct
atagcacagcattatcaacaactattcgctttagcccagcgctataacagccaacatcag
ctacagctgcctatagttatgaccggccatctaaccaccttgggcgtaacgcagtctgaa
tcagtacgagatatttatattggctcgcttgaagctttccccgcagatgcatttccaccc
gcagactatattgccctgggccatattcatcaaagtcagcagatcaaagccaatactgat
attcgctatagtggctcgccaattgcgcttagttttgacgaggctaatcagcaaaaacaa
gcctggttaattgaatttagcagtaataacaaaactgtatcgagtttagccataccttgt
tttcagcctttaattagtattaaaaccacgcttgatagcatcaaacccaacgtgcagcaa
gcacttaactcacttgagaaaaataaagtactgtggctagagttagtgatcacagaaact
gacgcctacttaactgatttgcagcaaagagtagaagccgagctagagggtttgcccgtt
gaactattacgtttacgccgccaacgtaatgaacaacttggtggcttaattgacgcggcc
caaaccagcttagccgaactaacgccaagccaagtatggcaagcccgcctaagcagcgaa
agccttactgatcagcaacagcagcaactgacgaatttacatactcaggtactggcaaaa
gtgcaggaaacaccatga
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