Rheinheimera sp. D18: E0Z06_14605
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Entry
E0Z06_14605 CDS
T05923
Name
(GenBank) LysR family transcriptional regulator
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
rhh
Rheinheimera sp. D18
Brite
KEGG Orthology (KO) [BR:
rhh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rhh03000
]
E0Z06_14605
Transcription factors [BR:
rhh03000
]
Prokaryotic type
Helix-turn-helix
LysR family
E0Z06_14605
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
HTH_24
HTH_5
MarR
HTH_28
HTH_20
DDE_Tnp_1
Motif
Other DBs
NCBI-ProteinID:
QBL10660
UniProt:
A0A4P6VW63
LinkDB
All DBs
Position
complement(3115321..3116205)
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AA seq
294 aa
AA seq
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MSRLNYHHLYYFWQVAKGGNLTETAQRLHISQSALSAQIKQLEQSMRVQLFLRQGRKLVL
TDSGYHTLKYAEDIFSRGAELEQLLINGAQPQHSPIRIGTLATMSRNFIESFIAPLLATA
DSRFSLLSMNQTTLLNALAQHQLDLALSNVAVQANDNQLWQCRLLARQPVAVIGAPGKAL
SDNLASYRQQRWVLPPVQSSIRMAFDALAAQYQLQPDVIAEADDMAMLRLLARDSGALTV
IPDVVVKDELSSGRLHKYLTLPQVYENFYIITTQRELTHPQLNRLLQAYTATAL
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgagccgactaaactaccatcacctgtattatttttggcaggttgctaaaggcggtaac
ctaaccgaaaccgcgcagcggctgcatatttcgcagtctgctttgtcggcgcaaattaaa
cagttagaacaaagcatgcgggtacagctgttcttgcgacaggggcgtaaactggtgctg
accgatagcggttatcacacgctgaaatatgcagaagatatttttagtcgtggcgccgag
ctagaacagctgctgataaacggcgcgcaaccacaacatagcccaatccgcattggtacc
ttggcaacgatgtcgcgtaattttatcgaaagctttatcgcaccgctattggccacagca
gacagccgctttagtttattatcgatgaatcaaactacgctgcttaatgcgctggcacag
catcaactggacttagcgctcagcaatgttgcggtacaagctaacgataaccaactgtgg
caatgtcgtttgttagcgcgtcagcccgtcgccgtaattggcgctcctggtaaagcgctt
agtgacaatctggctagctatcggcaacagcgctgggtattaccgccggtacaaagctcc
atccgcatggcgtttgatgccttagctgctcagtatcagttgcaacccgacgttatagct
gaagccgacgatatggcaatgctgcgcttactggcccgtgatagcggtgccctcacggtt
attcccgatgttgtggtaaaagatgagctaagcagtggccgtttgcacaaatacctcacc
ttacctcaggtatacgagaatttttatattattaccacgcaacgtgaattaacccatccg
caactgaaccggctattacaagcctatactgcgaccgcgttataa
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