Rheinheimera sp. D18: E0Z06_15240
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Entry
E0Z06_15240 CDS
T05923
Symbol
ssb
Name
(GenBank) single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
rhh
Rheinheimera sp. D18
Pathway
rhh03030
DNA replication
rhh03430
Mismatch repair
rhh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E0Z06_15240 (ssb)
03430 Mismatch repair
E0Z06_15240 (ssb)
03440 Homologous recombination
E0Z06_15240 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhh03032
]
E0Z06_15240 (ssb)
03400 DNA repair and recombination proteins [BR:
rhh03400
]
E0Z06_15240 (ssb)
03029 Mitochondrial biogenesis [BR:
rhh03029
]
E0Z06_15240 (ssb)
DNA replication proteins [BR:
rhh03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
E0Z06_15240 (ssb)
DNA repair and recombination proteins [BR:
rhh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
E0Z06_15240 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
E0Z06_15240 (ssb)
Mitochondrial biogenesis [BR:
rhh03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
E0Z06_15240 (ssb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
DUF3127
tRNA_anti-codon
Pro-rich
Motif
Other DBs
NCBI-ProteinID:
QBL10774
LinkDB
All DBs
Position
complement(3237873..3238484)
Genome browser
AA seq
203 aa
AA seq
DB search
MARGINKVILIGNLGTDPEVRYMPQGGAVANLTVATSESWTDKASNEKKEQTEWHRVVIY
QRLAEIAGEYLRKGSKVYIEGKLKTRKWQDKDGVERYTTEIIANELQMLDGRGDNQQQGG
MGGGQQGGFQKAAPQQQGGYQQAPQQGGFQPQSGGYQQAAPQQQGGFQPQRPAAQPQQGY
QQPAQPQRAPMEPPIDFDDDIPF
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtggcattaataaagttattttgattggtaatctgggcactgatccagaagtg
cgttatatgccacaaggcggtgcagtagctaatttaaccgtagccacctcagaaagctgg
actgataaagctagcaatgaaaagaaagaacaaactgaatggcatcgggtggtaatttac
caacgtttagccgaaattgccggtgaatacctgcgtaaaggcagcaaagtttatattgaa
ggaaagctgaaaacccgtaagtggcaagataaagatggtgtagagcgttacaccacagag
attattgccaatgagctacagatgttagacggccgtggtgacaaccagcaacaaggcggt
atgggcggcggccagcaaggtggcttccaaaaagccgcaccacaacagcaaggcggttat
cagcaggcaccacaacaaggtggctttcaaccgcaaagcggtggttaccaacaagctgca
ccacagcagcaaggcggctttcagccacaacgcccagcagctcaaccacaacagggttac
cagcaaccagcacagccacaacgcgcgccaatggaaccgccaatcgactttgacgacgat
attccgttctaa
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