Sinorhizobium fredii NGR234: NGR_a00470
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Entry
NGR_a00470 CDS
T00888
Symbol
syrM2
Name
(GenBank) LysR-type transcription regulator SyrM2; involved in flavonoid dependent regulation
KO
K25882
LysR family transcriptional regulator, transcriptional activator of nodD3 and syrA
Organism
rhi
Sinorhizobium fredii NGR234
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rhi03000
]
NGR_a00470 (syrM2)
Transcription factors [BR:
rhi03000
]
Prokaryotic type
Helix-turn-helix
LysR family
NGR_a00470 (syrM2)
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
AAB91963
UniProt:
P55733
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Position
pNGR234a:complement(59402..60421)
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AA seq
339 aa
AA seq
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MDQPAWKNPRTALIVDGSDAARQRRIPNLASVDLNLLVELEALLQYRNITHAAQHVGRSQ
PAMSRALSRLRDMFNDDLLVRGSSGLVPTPQAEHLAQMLPSVLNAIRELVSCSSGLRDLR
SKVTMAMPDHQSLVLLPYLLPRLGERVPHVDIVTEPLLDGALRRLEQGEIDFAIGQIGAA
PPGYLRRGLYADRFTCLLRHDHPALEQEWSVGTFAALRHASIASDSNEGLGQVYDGLVRF
GLPGPIVVSNVLTAAVVVAMTDLVLMIPNRVATRVATMLPLAIVDPPVELKPYEVALIWH
QRCHHDLEHRVLRREIAAAARMGRLDVSQDQRARRQNDS
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggatcagcccgcttggaagaatccgcgtacggccctgatcgtcgatggcagtgacgct
gcacgtcaacggcgtataccgaatctggcgtcggtcgacctaaacctgctagtggagctc
gaggccttattgcagtatcgaaacatcacgcatgcggctcaacatgtcggtaggagccaa
ccggcaatgagtagagccctatcaaggctgcgtgacatgttcaatgacgatctcttggta
cgcggctcgagtggcctagtcccaacaccgcaggccgaacacttggcgcaaatgctgccg
tcggtattgaatgctatccgcgaactggtgagctgcagttccggcttaagggatttgcgg
tcgaaggtaactatggcaatgcccgatcaccaatcgctagttctgctgccatatctattg
ccgcgtttaggtgagcgtgtgcctcatgttgacatcgtcaccgagccacttttggacggc
gctctacggcgtctcgagcaaggtgagattgactttgcgatcgggcagattggtgccgct
cctccaggctacttgcggcgcggtctctatgcggaccgcttcacttgcctgcttcgccac
gaccaccctgcattagagcaggagtggagcgtcggaaccttcgcggcgctgcgtcacgcc
tctattgcctcggattccaacgagggcctgggtcaagtctatgatgggctggtcaggttc
ggactacccggtccgatagtggtctccaacgtgctgactgcggcagttgtagtggcgatg
actgacctagtgctgatgataccgaaccgagttgcaactcgggtggcgactatgctgccg
ctcgctattgtagatccacccgtggagctgaagccatacgaagttgcgttgatctggcac
cagcgctgccatcatgacttggaacatcgcgtgctgcgtcgcgaaatcgccgccgcagcg
cggatgggccggctagacgtgtcacaagaccaaagggcgaggcggcagaacgatagttga
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