Sinorhizobium fredii NGR234: NGR_a01310
Help
Entry
NGR_a01310 CDS
T00888
Name
(GenBank) putative transposase number 1 of insertion sequence NGRIS-36a
Organism
rhi
Sinorhizobium fredii NGR234
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mu-transpos_C_2
rve
HTH_23
HTH_29
Sigma70_r4_2
GntR
rve_3
HTH_24
Fe_dep_repress
HTH_Crp_2
HTH_36
HTH_AsnC-type
HTH_68
PaaX
NirdL-like_HTH
Motif
Other DBs
NCBI-ProteinID:
AAB91881
UniProt:
Q53201
LinkDB
All DBs
Position
pNGR234a:160257..161801
Genome browser
AA seq
514 aa
AA seq
DB search
MPTRRLLMRQVREILKLRLDVGLSNRIIAKQLGVGETSVRDTLKRLHREGLTWPLPDTIS
DRELEQRLYGTPGKKAGRRKQSEPDWSAVARELKRKHVTLQVLWEEYIARDPDGFRYSRY
CELFRNWHGRLPLVMRQSHAGGEKLFVDYAGDKVAVVDRKTGVVRDAHIFVAVMGASSLS
FALATWSEQLPDWIEAHNAAYRFFGGVTQLLVSDNTKCAVIKACHFDPMVNRSYTDMARH
YSTAVFPARPRKPRDKAKVENCVGIVERWLLGRLRNRTFYSLADLNKAIADLITRLNDER
VIRQYGKTRRALFDELDAPNLKPLPAEPWVHAEWRRCRVGIDYHIELSRHFYSVPYRFAR
SEVEVRYTIRTVEIFLGGDRIAAHVRGSSNGRHTTVAVHMPPNHQRYREWTPAKIRSEAK
RIGPMLRVLVDRIIEKRAHPEQGYRACVGIIGLERRFGVDRLEAAAQRALEFQVLNYPGI
KSILEKELDRLPRSERLEQEPIQHSNLRGSEYYH
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
ttgccgacgaggagactcctgatgcgccaggtgcgcgagattttgaaactgcggctggat
gtcggtctttcgaaccgcatcattgccaagcaactgggcgtcggggagacttcggtccgc
gacacgttaaagcgattgcaccgggaaggactgacatggcctttaccggatacgatcagt
gaccgcgagctggagcagcgcctttacgggacgcccggtaagaaagctgggcgtcggaag
cagtccgagcccgactggtctgccgtcgcgcgcgaattgaagcgcaagcatgtgacgttg
caggtgctctgggaggagtacattgctcgggatccagacgggttccgatattcgagatac
tgtgagttgttccgaaactggcatggccggctgcctctggtgatgcggcaaagccatgcc
ggcggcgagaagctgtttgtcgattatgccggtgacaaggtggcagtcgtcgaccgcaaa
accggcgtggtgcgggacgcacatatcttcgtggcggtgatgggggcgtccagcctgtcg
ttcgcgctggcgacgtggagcgaacagttgcccgactggatcgaggcgcacaacgcagcc
taccggttttttggtggggtgacgcaactcctggtcagcgacaacaccaaatgcgcggtg
atcaaggcttgtcacttcgatccgatggtcaatcgttcctatacggatatggcgcgccat
tacagcacggcagtttttccagcacgcccgagaaaaccgagggacaaggcaaaagtcgaa
aattgcgtcggaatcgtagagcgttggcttctgggtcggctgcggaaccggaccttttat
agcctcgctgatctcaacaaggccattgccgatctgatcacccggctcaatgacgaacgg
gtgatacgccagtacggcaagacgcggcgcgcgttgtttgacgaacttgatgccccgaat
ctgaagccgctacctgccgagccctgggtgcatgcggaatggcgtcggtgtcgtgttggc
atcgattatcatattgaactcagtcggcatttttattccgtcccttaccgctttgcgcgt
agcgaagtcgaggttcgatacaccattcgcacggtggaaatattcctcggcggcgaccga
attgccgcgcatgtgcgtggcagcagcaacggccgccacacgacggttgcggtgcatatg
ccgccaaaccatcagcgttatcgcgaatggacgccggcgaagatccgcagcgaggccaag
cggatcgggccgatgctgcgcgttctcgtcgatcggatcattgagaagcgcgcgcatccc
gaacagggataccgtgcctgtgtcggcatcatcggcctggaaagacggtttggcgtcgat
cgccttgaagcggctgcgcagcgcgcgctggaattccaggtgctcaactatcccggcatc
aaatccattctcgaaaaggaactcgaccgcctcccaaggtccgagcgcctcgagcaggaa
ccgatccagcattccaacctccgcggctccgaatactaccattga
DBGET
integrated database retrieval system
