Sinorhizobium fredii NGR234: NGR_a03580
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Entry
NGR_a03580 CDS
T00888
Symbol
rmlB
Name
(GenBank) dTDP-glucose 4,6-dehydratase RmlB
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi00521
Streptomycin biosynthesis
rhi00523
Polyketide sugar unit biosynthesis
rhi00525
Acarbose and validamycin biosynthesis
rhi00541
Biosynthesis of various nucleotide sugars
rhi01100
Metabolic pathways
rhi01110
Biosynthesis of secondary metabolites
rhi01250
Biosynthesis of nucleotide sugars
Module
rhi_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NGR_a03580 (rmlB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
NGR_a03580 (rmlB)
01055 Biosynthesis of vancomycin group antibiotics
NGR_a03580 (rmlB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
NGR_a03580 (rmlB)
00525 Acarbose and validamycin biosynthesis
NGR_a03580 (rmlB)
Enzymes [BR:
rhi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
NGR_a03580 (rmlB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
KR
PIG-H
Motif
Other DBs
NCBI-ProteinID:
AAB91680
UniProt:
P55462
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All DBs
Position
pNGR234a:complement(459311..460363)
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AA seq
350 aa
AA seq
DB search
MRILVTGGAGFIGSALVRYLVSINAEVLNVDKLTYAGNLASLKPVEGLRNYRFLRADICD
RVAINEAFETFQPDYVIHLAAESHVDRSITGADDFVQTNVNGTFTMLETARQYWSNLSQN
RKAFFKMLHVSTDEVYGSLGDRGQFEEVSPYDPSSPYSASKAASDHFATAWQRTYGLPVV
ISNCSNNYGPFHFPEKLIPLMILNALDRKPLPVYGTGSNIRDWLYVDDHARALWLIVREG
RPGEKYNVGGRNELRNIDVVNRICLLLDELSPNASHYGDLITFVKDRPGHDARYAIDATK
LETELGWKAQENFDTGIRKTVEWYLENGWWWQPLRDKVYSGERLGLLEKA
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattttggtgactggtggcgccggctttatcggatcagcgctggttcggtatctc
gtgagcatcaacgcggaggtcctgaacgttgacaagttgacctacgctggcaacctcgct
tcgctgaagccggtcgaaggtctccgcaactatcggttccttcgcgccgatatctgcgac
cgagtggcgataaacgaagctttcgagacgtttcagccggattacgtcattcatctggcg
gcggaaagtcacgtagatcgctcgatcaccggagcggacgacttcgtccagactaacgtg
aacggaactttcacaatgctggagacagcgcggcaatactggagcaatctgtcccagaat
cggaaggcattctttaagatgctgcatgtgtcgaccgacgaggtttatggctcacttgga
gaccgcggtcagttcgaggaggtttcaccgtacgacccatcttctccctactcggcttca
aaggcggcgagcgaccattttgcaaccgcatggcagcgaacatatgggcttcccgtggtc
atttcgaattgctccaacaactatggaccgttccacttccccgagaaactgatcccgctg
atgattctcaatgcattggataggaagcctttgcccgtctatgggacgggttccaacatt
cgcgattggctctatgtcgacgaccatgcccgagccctttggctgatcgtcagggaaggc
cgtcctggtgagaaatacaatgtcggaggtcgcaacgagttgcgcaatatcgacgtcgtc
aaccgcatatgcttgctcctcgatgagcttagtcccaacgcttcgcactatggtgaccta
attactttcgtgaaagacaggccgggtcacgacgcacgctacgccattgacgccacgaag
ctcgaaaccgagcttggctggaaggcgcaggagaatttcgataccggcatacgcaaaacg
gtggaatggtatctggaaaatggctggtggtggcaaccgctgcgggacaaggtttattcc
ggtgagcgcctcggtctcctggagaaagcgtga
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