Sinorhizobium fredii NGR234: NGR_a03840
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Entry
NGR_a03840 CDS
T00888
Name
(GenBank) putative short-chain dehydrogenase
KO
K16066
3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:
1.1.1.381
1.1.1.-]
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi00240
Pyrimidine metabolism
rhi00260
Glycine, serine and threonine metabolism
rhi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
NGR_a03840
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NGR_a03840
Enzymes [BR:
rhi01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.381 3-hydroxy acid dehydrogenase
NGR_a03840
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Gene cluster
GFIT
Motif
Pfam:
adh_short
adh_short_C2
Epimerase
NAD_binding_10
KR
SDR
RmlD_sub_bind
Beta-ketacyl_N
Motif
Other DBs
NCBI-ProteinID:
AAB91654
UniProt:
P55434
LinkDB
All DBs
Position
pNGR234a:complement(493676..494422)
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AA seq
248 aa
AA seq
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MHPMNRYEVALVTGASSGIGKAIALELASAGLRVLALGRDRAALDELHSTAGIVPVVFDL
SDVSEVYGKIAGEKIDVLVNNAGLLTASASLVDLSEDDIDAMIDINIRSVFKLTRHVLKQ
MIERRRGHIFFTGSSGGLAPHPNSSVYGATKAAVSLFSSALRCDLIGLPIRVTELFPGRV
ETNLYRTALGKEGAKKKLYDDNEAIQPEHMARLLRTALELPDFVDVTRLEVMPTGQVVGG
AQMSKLSR
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
ttgcatccgatgaacagatacgaagttgcccttgtcacaggggcctcgagcggtattggg
aaggcaatcgcgcttgagcttgcctcggccgggctcagggtccttgctcttggcagggac
cgtgctgcgcttgacgagcttcactcgaccgcgggcatcgtgcccgtcgtgttcgatctc
tctgacgtttccgaagtctatgggaaaatcgcgggggaaaagatcgacgtgctggtgaac
aacgccggattactcaccgcctcggcaagcctcgtcgacctgtctgaagacgatattgac
gcaatgatcgacatcaacattcggtcggtcttcaagctgacgcggcatgtcctgaagcag
atgatcgaacgtcgccgcggccatatctttttcaccggttcaagcggcggccttgcccct
catcccaactcttccgtttacggcgcgacgaaggcggccgtcagcctgttttcatctgca
ctgcgctgcgatctgatcggtctaccgatcagggtgacggagctttttcccggccgcgtt
gagacgaacctctatcggacagcgctcggcaaagagggcgcaaagaagaagctctacgac
gacaatgaggcgatccagcccgaacacatggcgcgactgctgcgtacggcgctggagttg
ccggacttcgtcgacgtaacccgcctggaagtgatgccgacgggccaagtagtcggcggc
gcccagatgtccaaactttctcgttaa
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