KEGG   Sinorhizobium fredii NGR234: NGR_a04170
Entry
NGR_a04170        CDS       T00888                                 
Symbol
trbEb
Name
(GenBank) product corresponding to the carboxy-terminus of conjugal transfer protein TrbE
  KO
K20530  type IV secretion system protein TrbE [EC:7.4.2.8]
Organism
rhi  Sinorhizobium fredii NGR234
Pathway
rhi02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:rhi00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    NGR_a04170 (trbEb)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rhi02044]
    NGR_a04170 (trbEb)
Enzymes [BR:rhi01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     NGR_a04170 (trbEb)
Secretion system [BR:rhi02044]
 Type IV secretion system
  Trb secretion system protein
   NGR_a04170 (trbEb)
SSDB
Motif
Pfam: CagE_TrbE_VirB P-loop_TraG AAA_22 ABC_tran AAA_29 AAA_10 AAA_23 DUF87 ATPase_2 AAA_21 AAA_16 FtsK_SpoIIIE T2SSE nSTAND3 Ribosomal_L13e MC4 TrwB_AAD_bind BRCA-2_helical ORC-CDC6-like AAA_7
Other DBs
NCBI-ProteinID: AAB92432
UniProt: P55399
LinkDB
Position
pNGR234a:complement(530715..532703)
AA seq 662 aa
MLFIFKNAIREIEQYFANTLSIRRMETREAAERGGERVARYDELLQFIRFCITGENHPIR
LPAAPMYLDWIATAELEHGLTPKVENRFLGVVAIDGLPAESWPGILNSLDLMPLTYRWSS
RFIFLDAEEARQKLERTRKKWQQKVRPFFDQLFQTQSRSVDRDAMTMVAETEDAIAQASS
QLVAYGYYTPVIILFDSDREALQEKAEAIRRLIQAEGFGARIETLNATEAYLGSLPGNWY
CNIREPLINTSNLADLIPLNSVWSGSPVAPCPFYPPNSPSLMQVASGSTPFRLNLHVDDV
GHTLIFGPTGSGKSTLLALIAAQFRRYDRSQIFAFDKGSALLPLTLAAGGDHYEIGGDNA
EGRKALAFCPLSDLESDADRAWAAEWIEMLVALQGVTITPDHRNAMSRQVTLMASAPGRS
LSDFVSGVQMREIKDALHHYTVDGPMGQLLDAEHDGLSLGAFQTFEIEQLMNMGERNLVP
VLTYLFRRIEKLLDGSPSVIVLDEAWLMLGHPVFRAKIREWLKVLRKANCAVVLATQSIS
DAERSGIIDVLKESCPTKICLPNGAAREPGTREFYERIGFNERQIEIISNATPKREYYVV
TPEGRRLFDMALGPVALSFVGASGKEDLNRIRTLHSEYDRDWPVHWLQMRGFHDAASLFN
VE
NT seq 1989 nt   +upstreamnt  +downstreamnt
gtgctcttcatcttcaagaacgccatccgcgagatcgagcagtatttcgccaacaccctt
tcgatccggcgcatggaaacgcgcgaggccgccgagaggggaggggagcgtgtcgcccgc
tatgatgaactgctgcaatttatccgattctgcatcaccggcgaaaaccatccgatccga
ttgccagctgctcccatgtatcttgactggatcgcgaccgccgaactcgagcatggtctg
acgccgaaggtcgagaaccggttcctcggtgtcgtggcgatcgacgggctccccgccgag
agctggccgggcatcctcaacagcctcgaccttatgcctttgacgtatcgctggtcgtcg
cgcttcatcttccttgatgcggaagaggcgcgtcagaagctcgaacgcacgcgcaagaag
tggcagcagaaggtccggccgttcttcgaccagctatttcagacgcaaagccggtcggtc
gaccgggacgccatgacaatggtggccgaaaccgaggatgccatcgcgcaagcgtcttcg
cagcttgtcgcctatggctattacacacccgtgatcattctcttcgacagtgatcgcgaa
gcgctgcaggaaaaagccgaggctatccgccggctgatccaggccgaaggatttggggcg
aggatcgaaacactcaacgcgaccgaggcctatctcgggagcttgcccggcaactggtat
tgcaatatccgcgaaccgctgatcaacaccagcaatctcgccgatctcattcccctgaac
tccgtgtggtcgggaagcccggtcgcaccttgccctttctatcctcccaattctccgtcg
ctgatgcaggttgcaagcggttcgacaccgttccggctgaacctgcatgtcgacgacgtc
ggccacacactgatctttggtccgacgggatccggcaaatccacgctgctggcgctgatc
gcggcacagttccgacgctatgatcgttcccagatcttcgcctttgacaaaggaagcgcg
ctcctaccgctaacgctggctgccgggggcgatcattacgagatcggcggcgacaatgcg
gaagggcgtaaggcactggccttttgtccgctgtcggatctcgaaagtgacgccgatcgg
gcttgggccgcggagtggatcgagatgctggtcgctctgcagggtgtcactatcacgccc
gatcatcgcaatgccatgtcccgccaggtcaccctaatggccagcgctcccggacgatcg
ctctccgatttcgtgagcggcgtgcagatgcgcgagatcaaggacgccctgcatcactat
acagtcgacgggcccatgggtcagcttctcgacgccgagcacgacggactatcgctcggc
gcctttcagaccttcgagatcgagcaactcatgaacatgggcgagcgcaatctcgtcccc
gtgctcacctatctgttccgtcgcattgagaaactgctcgacggctcgccgagtgtgatc
gtgctggacgaggcttggttgatgctcggccacccagtattcagagccaagatccgcgaa
tggctgaaggtgctacggaaagccaattgcgccgtcgtcctcgcgacacaatcaatctcc
gacgcggagcgttccggcatcatcgacgtgctgaaggaatcctgcccgacgaagatctgc
cttccgaatggagccgctcgcgaacccgggacgcgcgagttctacgaacggatcggcttc
aacgagcggcagatcgagatcatttcgaacgccactccgaagcgcgaatactatgtcgtc
acccctgaaggccggcggctttttgatatggcgctcggtccggtggcgcttagtttcgtt
ggcgcatccggcaaggaagatttgaatcgcatccgaacacttcattccgaatacgaccgc
gactggccggtccactggcttcagatgagaggatttcacgatgccgcgtcgctgttcaat
gtcgaataa

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