KEGG   Sinorhizobium fredii NGR234: NGR_a04210
Entry
NGR_a04210        CDS       T00888                                 
Symbol
trbB
Name
(GenBank) conjugal transfer protein TrbB
  KO
K20527  type IV secretion system protein TrbB [EC:7.4.2.8]
Organism
rhi  Sinorhizobium fredii NGR234
Pathway
rhi02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:rhi00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    NGR_a04210 (trbB)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rhi02044]
    NGR_a04210 (trbB)
Enzymes [BR:rhi01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     NGR_a04210 (trbB)
Secretion system [BR:rhi02044]
 Type IV secretion system
  Trb secretion system protein
   NGR_a04210 (trbB)
SSDB
Motif
Pfam: T2SSE nSTAND3 DEAD AAA_16 LFE_1968-like ResIII DUF2680 Sigma54_activat ABC_ATPase FtsK_SpoIIIE AAA_28 Zeta_toxin AAA_19 Sld3_STD IstB_IS21 AAA_29 Bac_DnaA NPHP3_N
Other DBs
NCBI-ProteinID: AAB92428
UniProt: P55395
LinkDB
Position
pNGR234a:complement(533848..534825)
AA seq 325 aa
MEQLRSHPRLVRKLQEALGDQLCVALDDSNVVEIMLNPDGKLFIERLGHGVAPAGEMSSA
AAEMVIGTVAHALQSEVDTEQPIISGELPIGGHRFEGLLPPVVAKPSFTIRRRASRLIPL
DDYVRSGVMTEAQAATIRSAIDSRLNIIISGGTASGKTTLANAVIHEIVRSAPEDRLVIL
EDTAEIQCAADNAVLLRTSDTVDMARLLKSTMRLRPDRIVVGEVRDGAALTLLKAWNTGH
PGGVATIHSNTATSALRRLEQLTAEASQQPMHEVIGEVVDLIVSIERTPRGRRVRDIIQV
ERFANGRYEIESDQLTEEREERHVA
NT seq 978 nt   +upstreamnt  +downstreamnt
gtggaacagcttcgctctcatcctcgcctcgtccgcaagcttcaggaggcgcttggcgac
cagctctgcgttgctttggacgatagcaacgtagtagagataatgctgaatcccgatggt
aagctgttcatagaacggctcgggcacggcgtcgcgcccgctggcgagatgtcgtcggct
gcggcggaaatggtgattgggacggttgctcatgccctccaatccgaagtggacaccgaa
caacccatcatttccggtgagcttccgataggcggacatcgtttcgagggtctattgccg
ccagtggtcgcgaagccctccttcacaatccgtcgtcgggcatctcgcctgatcccactc
gacgactatgtccgctccggtgtgatgaccgaggcccaggctgcgacgatccgcagcgcc
attgactcacgcctcaacatcatcatttccggtggaactgcctccggcaaaacgacgctc
gcaaatgcagtaatccatgagatcgtgaggagcgcgccggaagaccggctcgtcatcctc
gaagacaccgccgaaatccagtgtgcggccgacaacgccgttcttcttcgtaccagcgat
acggttgacatggcgcggctgctcaagagcacgatgcgcctgcgtcccgaccgaatagtc
gtcggcgaggtgcgcgatggtgctgccctcaccttgctcaaggcatggaacaccggacat
ccaggcggcgtggcaacaatccactcgaacacggcgacttccgcgctccggcgcctggag
cagctgacggccgaagcaagccaacagccgatgcacgaggtgatcggggaggttgtcgac
ctcatcgtttccatcgagcgtacgccgcgaggccggcgtgtgcgcgacatcatccaggtc
gagcgcttcgccaacggccgatacgagatcgaatctgaccaactcaccgaagaacgggag
gagcggcatgtcgcgtaa

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