Sinorhizobium fredii NGR234: NGR_b04250
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Entry
NGR_b04250 CDS
T00888
Name
(GenBank) hypothetical protein
KO
K10439
ribose transport system substrate-binding protein
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi02010
ABC transporters
rhi02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NGR_b04250
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
NGR_b04250
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhi02000
]
NGR_b04250
Transporters [BR:
rhi02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
NGR_b04250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
DUF7243
Motif
Other DBs
NCBI-ProteinID:
ACP21888
UniProt:
Q6W1L8
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All DBs
Position
pNGR234b:426434..427495
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AA seq
353 aa
AA seq
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MRKFKSLKSSLSIASLLAALAAPAAAEDVSIDVGTDKPIVVQKGALKRIALFIEMGTNTA
VQSTVTGAQEAAALHSITVDVFDARFDIGRQVNQMQNALIGGYDAWIVAAIEGEQVCNMA
ASEAPKAGIPVAVVTMAICGRSINEGEAMWSPGTLTYIGGNESPNSFERVMQQAVIDHPG
PQKIAVLTGQPLHPITLAFDKALKKFLAENPQVTLAATHRTDYSPEMNQQKVQTTLQATP
DLDAIIGVYTNMSKGAVPALEAAGLQGKIRLYEAGGTVWSVDALKSGAIAATTGYYRGTA
AETAVEMLVKAFNGEPVPRAVMNDGHALIPGQSPGQVGIVTVANVDQYVPQSP
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaattcaaatcactgaagagctccctgtcaatcgccagcctgctcgccgcactg
gcggctcccgcagccgcagaggatgtctcgatcgacgttgggaccgacaagccgatcgtc
gtgcagaaaggcgcattgaagcgcatcgcgctcttcatcgagatgggaaccaacaccgct
gtccagtcgacggtgacaggcgctcaggaggccgcagcgctgcacagcatcactgtcgat
gtctttgatgcgcgtttcgacatcggccggcaggtgaaccagatgcagaatgcgctgatc
ggcggctatgacgcctggatcgtcgcggcgatcgagggcgagcaggtgtgcaacatggcc
gccagcgaggcgccgaaggccggcattccggtggcggtggtcacgatggcgatctgcggc
cgttcgatcaacgagggcgaagcgatgtggtcgcctggcacactcacctatatcggtggg
aacgaaagcccgaactccttcgagcgcgtgatgcagcaggcggtgatcgaccatcccgga
ccgcagaagatcgccgtgctgaccggtcagccgttgcacccgatcacgctcgccttcgac
aaggcactcaagaaattccttgccgagaacccgcaggtgacgctggctgccacccatcgc
accgactattcgccggaaatgaaccaacagaaggtgcagaccactctgcaggcaacgcca
gatctcgacgctatcatcggtgtctacaccaatatgtcgaagggcgcagtcccggcgctg
gaggcggcgggattacaaggcaagattcgtctctacgaagcaggcggtacggtgtggtcg
gtcgatgcgctgaagtccggcgccatcgccgccactaccggatactaccgcggcactgcc
gccgaaaccgccgtcgaaatgctcgtcaaggccttcaacggcgagcccgtgccacgcgcc
gtcatgaacgacggccatgcgctgatccccggacagtcgcccggccaggtcggaatcgtc
acggtcgccaatgtcgaccagtacgttcctcagtccccgtga
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