Sinorhizobium fredii NGR234: NGR_b05100
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Entry
NGR_b05100 CDS
T00888
Symbol
groEL3
Name
(GenBank) 60 kDa chaperonin 2
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NGR_b05100 (groEL3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhi03019
]
NGR_b05100 (groEL3)
03110 Chaperones and folding catalysts [BR:
rhi03110
]
NGR_b05100 (groEL3)
03029 Mitochondrial biogenesis [BR:
rhi03029
]
NGR_b05100 (groEL3)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhi04147
]
NGR_b05100 (groEL3)
Enzymes [BR:
rhi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
NGR_b05100 (groEL3)
Messenger RNA biogenesis [BR:
rhi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
NGR_b05100 (groEL3)
Chaperones and folding catalysts [BR:
rhi03110
]
Heat shock proteins
HSP60 / Chaperonin
NGR_b05100 (groEL3)
Mitochondrial biogenesis [BR:
rhi03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
NGR_b05100 (groEL3)
Exosome [BR:
rhi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NGR_b05100 (groEL3)
Exosomal proteins of other body fluids (saliva and urine)
NGR_b05100 (groEL3)
Exosomal proteins of breast cancer cells
NGR_b05100 (groEL3)
Exosomal proteins of colorectal cancer cells
NGR_b05100 (groEL3)
Exosomal proteins of bladder cancer cells
NGR_b05100 (groEL3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF7342
Motif
Other DBs
NCBI-ProteinID:
ACP21972
UniProt:
Q6W1D5
LinkDB
All DBs
Position
pNGR234b:complement(518288..519916)
Genome browser
AA seq
542 aa
AA seq
DB search
MAAKEVRFHTEAREKMLRGVDILANAVKVTLGPKGRNVVLDKSFGAPRITKDGVTVAKEI
ELEDKFENMGAQMVREVASKTSDIAGDGTTTATVLAQAIVKEGAKAVASGMNPMDLKRGV
DKAVDAVVEELRRNARKVTKNDEIAQVGTISANGDTEIGRFLAEAMEKVGNEGVITVEEA
KTAVTELEVVEGMQFDRGYLSPYFVTNPDKMRVELEEPYVLIHEKKLSNLQALLPVLESV
VQSGKPLLIIAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGTA
ISEDLGIKLENVTLDMLGRAKKVVVEKENTTIVDGAGSKTEIEGRVAQIKAQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGSTEVEVKERKDRVDDAMHATRAAVEEGVLPGGGVALL
RAVKALDRVQTENPDQRHGIEIVRRAIEAPVRQIAENAGAEGSIIVGKLREKTEFGYGWN
AQTNEFGDLFEQGVIDPVKVVRTALQDAASVAGLLITTEAMVAEKPKKEAPVPPMPPGGM
DF
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaggaagtgagattccacaccgaagcccgcgagaagatgctgcggggcgtc
gacattctcgccaatgctgtgaaagtgacgttgggcccaaagggccgcaacgtggtgctc
gacaagtcgttcggcgctccgcggatcaccaaggacggcgtcaccgtcgccaaggagatc
gagctcgaggacaagttcgagaacatgggcgcccagatggtgcgcgaagtggcctccaag
accagtgacatcgccggcgacggcaccaccacggcaacagttctcgcccaggcgatcgtc
aaggaaggagcaaaagcggtcgcctccggcatgaacccaatggacctcaagcgtggcgtc
gacaaggcggtggatgctgtggtcgaggagttgcggaggaacgcccgcaaggtcacaaaa
aacgatgaaatcgcccaggtcggcacgatctcggccaatggcgacacggaaatcggccgc
ttcctggcagaagcgatggaaaaggtcggcaacgaaggggtgatcacggtcgaggaagcc
aaaaccgcggtgacggaactcgaggtcgttgagggcatgcagttcgaccgcggctatctc
tcgccctatttcgtcacaaatcccgacaagatgcgcgtcgagctggaggagccgtatgtg
ctcatccacgagaagaagctgtccaatctgcaggcgctgcttccggttctcgaatcggtc
gttcaatccggcaaaccgctgctgattatcgccgaggatgtcgagggcgaggcgcttgcc
accctcgtcgtcaacaagctgcgtggcggcctgaaggtcgctgccgtgaaagcgccgggt
tttggcgaccgccgcaaggccatgctcgaggacatcgccatcctgacgggcggtacggca
atctccgaggatctcggcatcaagcttgagaacgtgacgctcgacatgctcggccgcgcc
aagaaggtggtcgtcgaaaaggaaaacacgacgattgtcgacggggctggttcgaagacc
gagattgagggccgtgttgcccagatcaaggcgcagatcgaggaaaccacctcagactat
gatcgcgagaagttgcaggagcgtctcgccaagctcgccggcggtgttgcggtgattcgc
gtgggtggctcaaccgaggtcgaggtgaaggaacgcaaggaccgcgtcgatgacgcgatg
catgcaacgcgggcggcggtcgaagagggcgtgctgcctggcggtggtgtcgcgttgctg
agagccgtcaaagcccttgatagagttcagaccgagaaccccgaccagaggcacggcatc
gagattgtccgccgggcgatcgaagcgccggtgcgccagatcgccgagaacgcgggtgcc
gaaggttcgatcatcgttggtaagctgcgcgagaagaccgaatttggctatggctggaac
gcccagaccaacgagttcggtgacctttttgagcagggcgtaatcgatccggtcaaggtc
gttcgaaccgccttgcaggacgccgcctcggtcgccgggcttctgattaccaccgaggca
atggtcgccgagaagccgaagaaggaagcaccggttccaccgatgccgcctgggggcatg
gacttctga
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