Sinorhizobium fredii NGR234: NGR_b05210
Help
Entry
NGR_b05210 CDS
T00888
Name
(GenBank) putative transposase for insertion sequence NGRIS-20g
Organism
rhi
Sinorhizobium fredii NGR234
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DDE_Tnp_1_4
DDE_Tnp_1
Motif
Other DBs
NCBI-ProteinID:
ACP21980
UniProt:
Q6W1C6
LinkDB
All DBs
Position
pNGR234b:524710..526092
Genome browser
AA seq
460 aa
AA seq
DB search
MQTHCIAEQLEFEGFDGHKVVAGFDGGAITSDAGALLLRHVDGVIGLFDRVAACFVDDRD
PTCTVHSVRTLVGQRVAAIALGYEDVDDHDRLRHDPVLALLSERLTPKRQDCAVLAGKST
LNRLEHGRLGQPTRYHKIAYDRQALEALFIELFLDAHDSPPEEIVLDLDATDDPLHGHQE
GRFFHGYYNCYCYLPLYIFCGRHLLSAKLRRSNIDASAGSVAEIDRIIGQIRQSWPNVRI
ILRADSGFARDELMDWCETNKVDYVFGLARNPRLERQIAPAMEEASLLSQASAQATRVFR
DFLWSTKDSWTRRRRVVGKAEWTLLGANPRFIVTSLKSERWAAQTLYEDLYCARGDMENR
IKECQLDLYADRTSAHTMHANQLRLWFASLAYVLICALRRLGLAHTRLAEATCGTIRLKL
LKIGAQVRVSVRRIKIAMASACPYADEFALAHARIRAAAR
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacacactgtatcgccgagcagctcgaatttgaaggcttcgacggtcacaaagtg
gtcgctggtttcgacggcggagcgatcacctcggatgccggcgccctgctgcttcgccat
gtcgatggggtcatcggactgttcgaccgggtggccgcttgcttcgttgatgaccgcgat
ccgacgtgcacggtccacagcgtgcgcacgctggtcgggcagcgcgttgcggcgatcgcg
ctgggctacgaggatgtcgatgaccacgacaggctgcgccacgacccggtgctcgcgctt
ctgtcggagcggctgacgccgaagcggcaagactgtgcggtgcttgccggcaaatccacc
ttgaaccggctggagcacggccgtctcggccagccgacgcgctatcacaagatcgcttac
gacaggcaagcgctggaagcgctgttcatcgagctgttcctggacgcgcacgacagcccg
cctgaggaaatcgtgctcgatctcgacgccaccgatgatccgctgcacggtcaccaggag
ggtcggttctttcacggctattacaactgctattgctatctgccgctgtacatcttctgc
ggccgccacctgctttcggccaagctacggcgttcgaacatcgacgccagcgcaggctcg
gtcgccgaaatcgatcgtatcatcgggcagatccgccaaagctggccaaacgtgcgcatc
atcctgcgcgccgattccggcttcgcccgcgacgaactgatggactggtgcgagaccaac
aaggtcgactatgtctttggccttgctcgcaacccgcggctggaaaggcaaatcgcgccg
gccatggaggaagcaagcctgttatcccaggcaagcgcccaggcgacccgcgtcttccgc
gacttcctgtggtcgaccaaggacagctggacacgacgacggcgggtcgttggaaaagcg
gaatggacgctgctgggcgccaatccgcgcttcatcgtcacctcccttaagtcagagcgc
tgggcggcacagacgctttacgaggatctctactgcgcccgcggtgacatggagaaccgc
atcaaagaatgccagctcgatctctacgccgaccgcaccagcgcccacaccatgcacgcc
aatcaactgcgcctctggttcgcctcgttggcctacgtgctgatctgcgccctgcgccgc
cttggccttgcccatacgcggctcgccgaggcgacctgcggcaccatccggctgaagctg
ttaaagatcggcgcccaggtccgcgtctcggtgcgtcgcatcaaaatcgcgatggcatcc
gcctgtccctatgccgacgaatttgcactggcacacgcccgaatacgtgccgcggcccgc
tga
DBGET
integrated database retrieval system
