Sinorhizobium fredii NGR234: NGR_b05820
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Entry
NGR_b05820 CDS
T00888
Symbol
groEL4
Name
(GenBank) 60 kDa chaperonin 2
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NGR_b05820 (groEL4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhi03019
]
NGR_b05820 (groEL4)
03110 Chaperones and folding catalysts [BR:
rhi03110
]
NGR_b05820 (groEL4)
03029 Mitochondrial biogenesis [BR:
rhi03029
]
NGR_b05820 (groEL4)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhi04147
]
NGR_b05820 (groEL4)
Enzymes [BR:
rhi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
NGR_b05820 (groEL4)
Messenger RNA biogenesis [BR:
rhi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
NGR_b05820 (groEL4)
Chaperones and folding catalysts [BR:
rhi03110
]
Heat shock proteins
HSP60 / Chaperonin
NGR_b05820 (groEL4)
Mitochondrial biogenesis [BR:
rhi03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
NGR_b05820 (groEL4)
Exosome [BR:
rhi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NGR_b05820 (groEL4)
Exosomal proteins of other body fluids (saliva and urine)
NGR_b05820 (groEL4)
Exosomal proteins of breast cancer cells
NGR_b05820 (groEL4)
Exosomal proteins of colorectal cancer cells
NGR_b05820 (groEL4)
Exosomal proteins of bladder cancer cells
NGR_b05820 (groEL4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Lar_N
Motif
Other DBs
NCBI-ProteinID:
ACP22040
UniProt:
Q6W163
LinkDB
All DBs
Position
pNGR234b:580029..581657
Genome browser
AA seq
542 aa
AA seq
DB search
MAAKEVRFHTDAREKMLRGVDILANAVKVTLGPKGRNVVLDKSFGAPRITKDGVTVAKEV
ELEDKFENMGAQMVREVASKTSDIAGDGTTTATVLAQAIVKEGAKAVASGMNPMDLKRGI
DKAVDAIVEELKTNARRVTKNDEIAQVGTISANGDIEIGRFLAEAVEKVGNEGVITVEEA
KTAVTELEVVEGMQFDRGYLSPYFVTNPDKMRVELEEPYLLIHEKKLSNLQALLPVLESV
VQSGKPLLIIAEDVEGEALATPVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGTA
ISEDLGIKLENVTLNMLGRAKKVVVEKENTTIVDGAGSKSEIQGRVAQIRAQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGSTEVEVKERKDRVDDAMHATRAAVEEGVLPGGGVALL
RAVKALDSIRTENADQKHGIEIVRRALEAPVRQIAENAGAEGSIIVGKLREKTEFGFGWN
AQTNEFGDLYDQGVIDPVKVVRTALQDAASVAGLLITTEAMVAEKPKKDAPLPPMPGGGM
DF
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaggaagtgagattccataccgacgcccgcgagaagatgctgcgcggcgtc
gatatcctcgccaatgccgtcaaggtcacgctgggcccgaagggacgcaacgtggtgctc
gacaaatcgttcggcgctccgcggatcaccaaggacggtgtcactgtcgccaaggaggtc
gaactcgaggacaagttcgagaacatgggagcgcagatggtgcgcgaagttgcctcgaaa
accagcgacatcgctggtgacggcaccaccaccgcgacagtgctcgcccaggcgatcgtc
aaggaaggtgcaaaagcggtcgcctccggcatgaacccgatggacctcaagcgcggcatc
gacaaggcggtcgacgctatcgttgaggaattgaagacaaacgcgcggagagtcaccaag
aacgacgagatcgcccaggtcggcacgatctcggccaacggggacatcgagattggccgc
ttcctcgccgaggctgtcgagaaagtcggcaatgaaggcgtcattacggtcgaggaagcc
aagaccgccgtgacggaactggaagtcgtcgaaggcatgcaattcgaccgcggttatctc
tcgccgtatttcgtcaccaacccggacaagatgcgggttgagctcgaggaaccttacctg
ctcatccatgagaagaagttgtcgaacctgcaggcgctgcttccggttctcgaatcggtc
gttcaatccggcaaaccgctgctgattatcgccgaggatgtcgagggcgaggcgcttgcc
acccctgtcgtcaacaagctgcgcggcggcctgaagatcgctgctgtcaaagcgccaggc
ttcggcgaccgccgcaaggccatgctggaggatatcgcgatcctcaccggcggaacggcg
atctccgaagatctcggcatcaagctcgagaacgtcaccctcaatatgcttggccgcgcc
aagaaggtcgtcgtcgagaaggaaaacacgacgatcgtcgatggcgcaggctcgaagagc
gagatccagggccgcgtcgctcagatcagggcgcagattgaggaaaccacgtcggactac
gatcgcgagaagctgcaggagcggctggccaagcttgccggcggcgttgccgtcatccgc
gttggcggctcgaccgaggtcgaggtgaaggaacgcaaggaccgcgttgacgacgccatg
catgcgacgcgggcggcggtggaggagggcgtgctgcccggcggtggtgtcgcgttgctg
agagccgtgaaggcactggacagcatccggaccgaaaatgccgaccagaaacatggcatc
gagatcgtccgccgtgcactcgaggcgccggtgcgccagatcgccgagaatgcgggtgcc
gagggttcgatcatcgtcggcaagctgcgcgagaagaccgaatttggttttggttggaac
gcccagaccaacgagttcggcgatctttacgatcaaggggtaatagatccggtcaaggtt
gttcgtaccgcgttgcaggacgccgcctcggtcgccggcctgctgattaccaccgaggca
atggtcgccgagaagccgaagaaggacgcaccgctcccgccgatgccgggaggcggcatg
gacttctga
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