Sinorhizobium fredii NGR234: NGR_b06080
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Entry
NGR_b06080 CDS
T00888
Name
(GenBank) putative ABC-type dipeptide/oligopeptide/nickel transport system, permease component
KO
K02033
peptide/nickel transport system permease protein
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NGR_b06080
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhi02000
]
NGR_b06080
Transporters [BR:
rhi02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
NGR_b06080
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Ortholog
Paralog
GFIT
Motif
Pfam:
BPD_transp_1
BPD_transp_1_N
Motif
Other DBs
NCBI-ProteinID:
ACP22066
UniProt:
Q6W137
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All DBs
Position
pNGR234b:complement(604671..605609)
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AA seq
312 aa
AA seq
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MRNFLLARLLQAGLVAVVVGALCFVLMRVMPGDAAMRIAAGRYGPDARIAEAAKMVRLEL
GLDRPLVAQFLEWLGNLLRLDLGHSLVTGSPVIHELKVQLGASVWLAASALALSLLIGPV
IGLFSGLKAGGAIDRLGLAGAVIFRAIPPFVLGLMLMLVFSKQLGWLPPAGFGSAREMLL
PALTLALGLAAMSSRVMRNSVAAVARAPYFAFARYKGLPESVVVRRHGLRNAAIPVVSYI
ALQAVYLVEGVVVVESLFAYPGIGHALVHAVVERDIPMVQGTALAMGLMFVVIAAIVDLL
THWLDPRMRRMA
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaacttcctccttgcgcgcctgctccaggcggggctagtggccgtcgtggtcggc
gccctttgtttcgtcctcatgcgcgtgatgcccggcgacgccgccatgcgcattgctgcc
ggccgctatggaccggatgcgcggattgccgaagcggcaaaaatggtcaggctcgagctg
ggcctcgaccggccactcgtagcccagttcctggaatggcttggcaacctcttgcgcctt
gatcttggacattcgctcgtcacgggctcgcccgtcattcatgagctgaaggtgcagctc
ggcgcgtccgtgtggctcgccgcatcggcgctcgcgctatcgcttctcatcggcccggtc
ataggtctcttctcgggactgaaggcgggaggcgccattgaccgtctgggtttggcgggt
gcggtgatcttccgcgccatcccgccgttcgtgctcggcctgatgctgatgctggtcttt
tcgaagcagctcggctggttgcctccagccggttttggctcggcgcgtgagatgctgctt
cccgcgctgacgctcgctctcgggctcgccgccatgtcgagccgggtcatgcgcaattcg
gtcgctgctgtcgcgagggcaccctatttcgccttcgcccggtataagggtctgccggag
tccgttgtcgtgcgccgacatgggcttcggaacgccgccatccctgtcgtttcctatatc
gcactgcaggccgtctacctcgtcgaaggcgtcgtcgtcgtggaatcgctttttgcctat
ccgggaatcggtcacgccctggtccatgcggttgtcgagcgggacattcccatggtgcag
gggacagccttggccatggggctgatgttcgtcgtcatcgccgccattgtcgaccttcta
acccattggctcgatccgcgtatgaggagaatggcatga
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