Sinorhizobium fredii NGR234: NGR_b06260
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Entry
NGR_b06260 CDS
T00888
Name
(GenBank) predicted ABC-type dipeptide transport system, periplasmic component
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NGR_b06260
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhi02000
]
NGR_b06260
Transporters [BR:
rhi02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
NGR_b06260
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GFIT
Motif
Pfam:
SBP_bac_5
ZMYND8_CC
Motif
Other DBs
NCBI-ProteinID:
ACP22084
UniProt:
Q6W118
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Position
pNGR234b:complement(623604..625214)
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AA seq
536 aa
AA seq
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MNDKITNWTRSDDVVVESAIRRGATRRELLQMLLAGGVAMTLGGVILGRASHALAATPAT
GGHLKVAGFTSSTADTLDPAKASNSTDYSRCSAVYNRLSNLDKSGTTQMELAESIESADA
KVWTVKLRKGVTFHDGKPLTSADVIFSLKRHLDPDVGSKVNAIAKQITGFKAVDDLTVEI
TLADANADLPTILALHHFMIVADGTTDFSKGNGTGPFVLENFEPGVRSVMRRNENYWKSK
GPYVDSFEFLAISDDSSRVNALLSGDIHVAAAINPRSERLVASQPGFVLSKSSANSYTNL
NMRLDAAPGQNKDFVAGMKHLINREQILRAALRGRGEIGNDQPVFPGNVYRNDDIKAKAY
DPEKAKFHFEKAGVFGQTIPVVASDAATGSVDMAMVIQAAAAEIGLRLDVQRVPSDGYWD
NYWLKAPIHFGNINYRPTPDILFSLLYASGAPWNESHYKSEKFDKMLIEARGSLDQEKRR
AIYSEMQAMVADEAGTIIPAYLTGIDAITDKLKGMETNPLGGMMGYRMAEHVWFEA
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacaagatcaccaattggaccagatccgacgacgtcgtggttgaaagcgccatc
cggcgtggcgccacgcgccgagaacttctccagatgctgctcgcgggcggcgtcgcgatg
actttaggcggggtcattctcggtcgcgcctcgcacgcgctggccgcaacgccggccacc
ggcggccacctcaaggtggcgggcttcacgtcttcgaccgccgacacgctcgatccggcc
aaagcttcgaactcgacggactattcacgctgcagcgcggtttataaccgcctctccaac
ctcgacaaatccggcaccacccagatggagctggccgaaagcatcgagagtgccgacgcc
aaggtgtggaccgtgaaattgcgcaagggcgttacgttccacgatggcaagccgctgaca
tctgcggacgtgatcttctcgctcaagcgccatctggatcccgatgtcggttccaaggtc
aatgccatcgcgaagcagataaccggtttcaaggcggtcgacgatctcacggtcgaaatc
acacttgccgatgccaacgcagatctgccgacaatcctggcgctgcatcacttcatgatc
gtcgccgacggcaccaccgacttctccaaggggaacggcacgggaccgttcgttctcgaa
aatttcgagccgggcgtacgctcggtcatgcggaggaacgagaactactggaagtctaag
gggccctatgtcgactcctttgagttcctggcgatcagcgacgatagctcgcgcgtcaat
gcgttgctgtccggagacatccatgtcgccgccgccatcaacccccgttcggagcgcctt
gtcgcaagccagccaggtttcgtcctgtcgaagtcgagcgccaacagctacaccaacctc
aacatgcgccttgacgcggccccgggtcagaacaaggacttcgtggccggcatgaagcac
ctgatcaatcgcgagcagatcctcagggcagctctgcgcgggcgcggcgaaatcggcaac
gaccagccggtctttccgggcaacgtctaccgcaatgacgatatcaaggcgaaggcgtac
gatcccgaaaaggcgaagttccatttcgagaaggccggcgttttcggccagacgattccc
gtcgtcgcttccgacgcggctaccggttcggtcgacatggcgatggtcatccaggctgcc
gctgccgagatcggtctgaggctggatgtccagcgcgtgccctcggatggttactgggac
aattactggctcaaggcgccgatccatttcggcaacatcaattacaggccgacgcccgac
atcctgttctcgctgctctacgcttccggggctccctggaacgagagccactacaaatcg
gaaaaattcgacaagatgctgatcgaagcgcgtggttcgctcgatcaggagaagcgcaga
gcgatctacagcgaaatgcaggcgatggtcgccgatgaggccggcaccatcattcccgcc
tacctgacaggtatcgacgccatcaccgacaagctcaaaggcatggaaaccaacccgctc
ggcggcatgatgggttaccgcatggctgagcatgtgtggttcgaagcctga
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