Sinorhizobium fredii NGR234: NGR_b06730
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Entry
NGR_b06730 CDS
T00888
Name
(GenBank) predicted ABC-type dipeptide transport system, periplasmic component
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NGR_b06730
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhi02000
]
NGR_b06730
Transporters [BR:
rhi02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
NGR_b06730
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Paralog
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ACP22131
UniProt:
Q6W0X1
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All DBs
Position
pNGR234b:676182..677846
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AA seq
554 aa
AA seq
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MTKDSTPKSGYSRRDALRLMAAGGIACFAAPNLLGKPAFADTANPTGRVVVGLSQEPTVF
HPLMAHIEVDDAVHFSLFDALFRMDPKGVLQPNLAAEVPTQQNGGISEDGLKWRVRLRDD
VRWHDGEPFTAEDVKFTLELITNPNFRAWRTGGHSLVRDITVVSPTELTWRMEEAFAPYL
SFLTETFMVPKHILEKEADPNAAAFNQAPVGTGAFKWAQRVAGDHLELVANPQYFGDGPY
VERLVFKYIPDMTVLYTQFKSGDIDLTDQAYITADHYEEAKTLPGRVVTLVSGASVESIY
LNLEKPQFKDPAVRKALYAAMDRKAIIDAIYYGVGTLTETFMPRTSYYYNPNLPAQEFNL
DRARQILDEAGWVPGPDGIRAKDGVRLSFANSTTSGNNLREQVQQFLQQTFAEIGVEMTI
SNLPAAVMFGEFWLKSQFDSAIAGVTHLIAADPDATNRLATSAIAAKGGKGSNVGQYSNP
EVDALLKKGAQTFDPEARREIYSRIQEIVREDLPFLPLFASTYVVGRKEGLEGWEPNSNT
RTASWHAAGWRWQS
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaagattctacaccgaaatcgggctattcacggcgcgacgcgctccgcttgatg
gcagcgggcggaattgcgtgctttgccgctcccaacctgctcggcaagcctgcctttgcc
gatactgctaacccaaccggccgcgtcgtcgtcgggctttcgcaggaacccaccgtcttc
catccgctgatggcccatatcgaggtagacgatgcggtccatttttccctattcgacgcc
ctcttccgcatggatccaaagggcgttcttcagcccaatcttgcggcggaagtgcccaca
cagcagaacggcggcatttcggaggacggtctgaagtggcgcgtccgcctgcgtgatgac
gttcgctggcacgatggcgagcccttcaccgccgaggatgtgaagttcactctcgagctc
ataaccaacccgaacttccgcgcctggcgcacgggcgggcattcactggtaagagatatc
acggtggtttcgccgactgagcttacctggcggatggaggaggctttcgccccttatctg
tcgttcctcaccgaaacctttatggtgcccaagcacattcttgagaaagaggccgatccc
aacgctgccgccttcaatcaggcgcctgtcggcaccggtgcattcaaatgggcgcagcgc
gtcgcgggcgatcatctcgagctggtcgcgaaccctcaatattttggggatggcccctat
gtcgagcggctcgtcttcaagtacatccctgacatgacggtgctctacacccagttcaag
agcggcgacatcgaccttaccgaccaggcatacatcaccgccgaccactacgaggaagcc
aagacattgccgggccgtgtggtgacgctggtatccggggcatcagtcgagtcgatctat
ctcaatctcgagaagccgcaattcaaggacccggctgtccgcaaggcgctctatgccgcg
atggacagaaaagcaattatcgacgcgatctattacggcgtcggcacgctcaccgagacg
ttcatgccacggacgtcctactattacaatccgaatctgccggcgcaggagttcaacctt
gaccgggcgcgacagatcctcgacgaggcgggctgggttccggggccggacggaatacgt
gccaaggacggggtgcggctgtcgttcgccaattcgacgacgtcgggcaacaatctgcgc
gaacaagtgcagcagttcctgcagcagacattcgcggagatcggcgtcgagatgacgata
tccaatctgccggcggccgtcatgtttggtgagttctggctcaagtcgcaattcgactcg
gccatcgcgggtgttacccatctcattgcggcggatccggacgccactaaccgcctcgct
accagcgcaattgctgccaagggcggaaaaggctcgaatgtcggccagtactccaatccg
gaagttgacgcgctgctcaagaaaggtgcccaaaccttcgatccggaggcgcgtcgcgag
atctactcccgtattcaggaaatcgttcgtgaggacctgccgttcctgccgttgtttgcg
tctacctatgtcgttggtcgcaaggaaggtctcgaggggtgggagcccaattccaacacc
cgcacggcctcctggcatgccgccggatggcgctggcaaagctga
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