KEGG   Sinorhizobium fredii NGR234: NGR_b10280
Entry
NGR_b10280        CDS       T00888                                 
Symbol
virB4
Name
(GenBank) VirB4 type IV secretion protein
  KO
K03199  type IV secretion system protein VirB4 [EC:7.4.2.8]
Organism
rhi  Sinorhizobium fredii NGR234
Pathway
rhi03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rhi00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    NGR_b10280 (virB4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rhi02044]
    NGR_b10280 (virB4)
Enzymes [BR:rhi01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     NGR_b10280 (virB4)
Secretion system [BR:rhi02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   NGR_b10280 (virB4)
SSDB
Motif
Pfam: CagE_TrbE_VirB P-loop_TraG AAA_22 AAA_16 FtsK_SpoIIIE ATPase_2 T2SSE ABC_tran NPHP3_N RsgA_GTPase cobW
Other DBs
NCBI-ProteinID: ACP22481
UniProt: C3KQX3
LinkDB
Position
pNGR234b:991994..994351
AA seq 785 aa
MSKIASRELEPETYIPYVRHVDETTIALDSRALMVVLALEGVSFETADVLDLNALHRDLN
TLYRNIADERLSIWTHVIRRRDNDYPDGVFKSPFSTSLDARYRERMVGEDLFCNDLYLTL
VWSPNRDPAEKITKLFSRLRRARQTGVELDQDALKLVRDKVFDVTAGLERFRPRLLSLAE
RNGLVFSEPSEVLHQIVGGRREPVPLTQGRISSAIYSDRVIFGRETVEIRHEGISRFAGM
FGFKEYPAKTLSGMLDGVLTAPFELILTQSFSFISKADARAIMGRKQNQMVSAGDKAASQ
LEELDAAMDDLESNRFVLGEHHLTLCVLAASVRELTDNLARARTNLTSGGAVVAREDLGL
EAAWWAQLPGNFRYRARSGAITTRNFAALSPFHSYPTGQKHGNEWGPAVAMLKTASGSPF
YFNFHYGDLGNTFVCGPSGAGKTVLLNFMLSQLEKHGPDIVFFDKDRGADLFVRAAGGTY
LPLKNGRPTACAPLKALQPTSRNKLFLTRWVGKLVGSASRELSTVELRDIAAAIDALSDL
PVERRTIGALRTFLDNTQPQGIAARLRRWETGGPLGWVFDNDADDIGIGAHFLGYDMTDF
LDNEEIRTPLMSYLFYRVEELIDGRRVIIVVDEFWKALADEEFRDLAENKLKTIRKQNGL
MLFATQSPRDAIASPIAHTIIEQCPTQVFLPNPRANRSDYVDGFKLTEREFFLIARELSN
ESRRFLVKQGHNSVVAELNLNGFDDELAILSGRTANIELADVIRTELGVRQDDWISIFHE
RRRKS
NT seq 2358 nt   +upstreamnt  +downstreamnt
ttgtctaagattgcctcccgcgaactcgagccggaaacctacattccctacgttcgccat
gtggatgagacgacgattgcgctcgattcaagggccttgatggtagtcctggcgctcgag
ggggtttcgttcgagaccgccgacgtcctcgatctcaatgccctgcaccgcgacctcaac
acgctttatcgcaacatcgccgacgagcgcctgtcgatctggacgcatgtcattcgccgc
cgcgacaacgactatccggatggcgtattcaaaagcccgttctcgacctcgctcgatgcc
cggtaccgcgagcgtatggtgggggaggatttgttttgcaatgatctctatctcacgctt
gtctggtcgccgaaccgtgatccggcggagaaaatcaccaaactgttttcgagattgcgg
agagcgcggcagaccggcgtcgagctcgaccaggatgcgctgaaacttgtgcgcgacaag
gtcttcgacgtgacggcaggtcttgaacgctttcgaccgcgcctcctgtcgctcgcggag
cgaaacggtctggtgttttccgaaccgagcgaggtcctgcatcagatcgtcggcggtcgt
cgcgaaccggttccgctgacgcaagggcggatatcgtcggcaatctattccgaccgggtc
attttcggccgcgagacggtggaaatccgccatgaaggcatcagccggtttgccggtatg
ttcggcttcaaggagtacccggcaaagaccctgagcggcatgctggacggcgttctgacc
gcccccttcgagctgatcctcacgcaatcattttcgttcatatcgaaggcggacgctcgc
gctatcatggggcgcaagcagaaccagatggtcagtgcaggcgacaaggctgcttcgcag
ctcgaggagctcgatgccgcaatggacgatctcgaatccaatcgtttcgtgcttggcgag
catcacctgacgctttgcgtattggccgcttcggtcagggaattgaccgacaatctcgcc
agggcccgcacaaatctcacgagcggcggcgccgttgtggctcgcgaagatcttgggctg
gaggcggcctggtgggcgcaattgccgggcaactttcgctatcgcgcccgctcgggcgcc
attacaacacggaattttgcggcgctgtctcccttccattcctatccgacagggcagaag
cacggcaacgaatgggggccggccgttgccatgctcaagactgcgtccggctcgccgttc
tacttcaacttccactacggcgatctcggcaacactttcgtctgcggtccatcgggtgcc
ggcaagaccgtgctcctcaatttcatgctctcccagctggagaaacatgggcctgacatc
gtgttcttcgacaaggatcgcggcgccgatctcttcgtaagggccgcgggtggcacctat
ctgcccttgaagaatggcaggccgaccgcatgcgcccctttgaaagcgctccagccgacg
tcgcggaacaagctgttcctgacgcgctgggtcggcaagctggtcggttcggcaagccgc
gaactttcgacggtcgaattgcgcgacatcgccgcggccatcgatgcgctttccgacctg
ccggtcgaacgccgcaccatcggggcgctcagaacttttctcgacaatacccagccgcaa
gggatcgccgcacgattgcgccgatgggagacgggagggccgctcggctgggtgttcgac
aatgacgccgacgatatcggcatcggcgcacattttcttggctatgacatgaccgacttt
ctcgacaacgaggaaattcgcacacccctgatgagctatctcttctaccgcgtcgaagag
ctgatcgacggacgtcgcgtcatcatcgtcgtcgacgaattctggaaggcgctcgccgac
gaggaattccgcgatctggccgagaacaagctcaagactattcgcaaacagaacgggctg
atgctctttgcaacgcagagcccgcgcgatgcgatcgcctcgccgatcgcccacacaatc
atcgaacagtgcccgacccaggtgttcctgccgaacccgcgcgccaaccgctccgattat
gtcgatggcttcaagctgaccgagcgtgagttttttctcatcgcccgcgagctttccaat
gaaagccgccgctttctcgtcaagcagggtcacaacagcgtcgtcgccgaattgaacctc
aacggcttcgacgatgagcttgcgatcctttccggccggacagcgaatatcgagctcgct
gacgtgatccgcaccgaactcggcgtgcgtcaagatgactggatttcgatcttccatgaa
cgaaggagaaaaagttga

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