KEGG   Sinorhizobium fredii NGR234: NGR_b10440
Entry
NGR_b10440        CDS       T00888                                 
Name
(GenBank) putative PIN domain signalling protein
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
rhi  Sinorhizobium fredii NGR234
Brite
KEGG Orthology (KO) [BR:rhi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rhi03016]
    NGR_b10440
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rhi02048]
    NGR_b10440
Transfer RNA biogenesis [BR:rhi03016]
 Prokaryotic type
  tRNA degradation factors
   NGR_b10440
Prokaryotic defense system [BR:rhi02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    NGR_b10440
SSDB
Motif
Pfam: PIN
Other DBs
NCBI-ProteinID: ACP22497
UniProt: C3KQY9
LinkDB
Position
pNGR234b:complement(1007306..1007707)
AA seq 133 aa
MISHLLDTNAVIALIGRSDRLVSRVLDSPQGSIGLPSVVAYELYFGGQKSAKVQHNLETL
RLLMADFPILDFDQNDAFVAGEIRAALAAKGTPIGPYDVLIAGQAKARGLTLVTNNVGEF
NRVENLQVEDWSL
NT seq 402 nt   +upstreamnt  +downstreamnt
gtgatctcgcatcttctcgacaccaacgccgtcattgccttgatcggccgctcggataga
ttggtcagccgggtactcgatagccctcagggcagtatcggcctgccgtcggtcgtcgcc
tatgaactctatttcggagggcagaaaagcgcgaaggtccaacacaacctcgaaaccttg
cgtttgttgatggcggattttccgatcctcgactttgaccagaacgatgcctttgtcgcg
ggcgaaatccgggctgctcttgccgcgaaggggacgcccatcggcccctatgacgtgctg
atcgcagggcaggcgaaagcccgtggcttgaccctcgtcaccaacaatgtcggcgagttc
aacagggttgagaacctgcaggtggaggattggtcgctgtga

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