Sinorhizobium fredii NGR234: NGR_b11120
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Entry
NGR_b11120 CDS
T00888
Symbol
glgX
Name
(GenBank) glycogen operon-like protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi00500
Starch and sucrose metabolism
rhi01100
Metabolic pathways
rhi01110
Biosynthesis of secondary metabolites
Module
rhi_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
NGR_b11120 (glgX)
Enzymes [BR:
rhi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
NGR_b11120 (glgX)
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
DUF3459
hDGE_amylase
Motif
Other DBs
NCBI-ProteinID:
ACP22565
UniProt:
C3KR57
LinkDB
All DBs
Position
pNGR234b:1072849..1075020
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AA seq
723 aa
AA seq
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MVWQEQSHRHQRCPLTSRTLQGGTTTRMNVAFSELDFLKPELGAEYTGQGTHFAVFSAHA
EKIELCLFSEDGSREAARLPLPKREGDIWSGYIEGLGPGTLYGYRAYGPYDPNNGHRFNP
NKLLLDPYAKQVAGEFVWDDALFGYTIGSPEGDLSFDERDSAPIMVKGVVQDPNFDWDGE
EAIRRPWTETIIYETHIRGMTMTHPAVPNELRGTFLGMASDPIIDHLVKLGVSAVELLPV
QYFLDDRYLTERNLRNYWGYQPLGYFAPHARYMKGTRITEFKTMVKRFHAAGIEVLMDVV
YNHTAEGSEYGPTLSFRGLDNLSYYRQSPEQPRHTYDMTGTGNTLNVAHPMVLRMVLDSL
RYWVGVMHIDGFRFDLASALGREYMEFDREGGFFDAIRQDPILAGVKLIAEPWDIGEGGY
QLGGFPPPFREWNDRFRDDVRRFWKGDGGVVPVLAERLAGSPVQFNHSGRAATTSVNLLS
AHDGFTLMDAVSYAEKHNEANGEDNRDGHSDNHSDNMGAEGPTDDHRIDEARRRRRFAML
ATLMVSQGVPMVLGGDELGNSQGGNNNAYCQDNEIGWIDWSRLDDTFLAFCRKIIAFRRE
HPVLRQENFLEGATDEHGRIEVAWYKPDGSRMDEAAWGDGELRILGVYLCHLSPAEAPAE
EMFLVFNAGGDCDVALPSVHGSEIWQWALNTAEDDAFVAQRARERETIRAQSVAAFVPHD
SGG
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggtttggcaggaacaaagtcaccgccatcagcgttgccccctcacttccaggacgctg
caggggggcacgacgacacgaatgaatgtggctttctccgaactcgatttcctgaagccg
gagcttggcgccgagtataccggccaaggtacccatttcgcggtcttctccgcacatgcc
gaaaagatcgagctttgtctcttttccgaggacggcagcagggaagcggcccgcctgccg
ctgccgaagcgtgaaggcgacatctggtccggttatatcgaagggctgggcccgggcaca
ctctacggttatcgcgcctacgggccctatgacccgaacaacgggcatcgttttaacccg
aacaagctgctcctcgatccctatgccaagcaggtggccggggaattcgtctgggacgac
gcgctgttcggctacacgatcggtagcccggaaggcgatctttcgttcgacgagcgcgac
agcgccccgatcatggtgaagggcgtcgttcaggatccgaacttcgactgggacggcgaa
gaggcgatccgccgtccctggaccgagacgatcatctacgagactcatattcgcggcatg
accatgacgcatccggccgtgccgaacgaattgcgcggcaccttcctcggcatggcaagc
gacccgatcatcgatcatctggtgaagctcggcgtctccgctgtcgaacttctgccggtg
caatatttcctcgacgatcggtatctcaccgaacgcaacctcaggaactattggggctac
cagccgctcggctacttcgcaccgcatgcgcgctacatgaagggtacccggattaccgag
ttcaagacgatggtgaagcgcttccatgccgctggcatcgaggttctcatggacgtcgtc
tacaaccataccgccgaaggttcggagtacggcccgacgctcagtttccggggtctggac
aatctcagctattaccggcaatcgccggaacagccccggcatacttatgacatgaccggc
accggaaatacgctgaacgttgcgcatccgatggtgctgcgcatggttctcgacagcctc
cgctactgggtcggcgtcatgcacatcgacggtttccgcttcgatctggcaagtgccctc
gggcgcgaatacatggagtttgaccgcgagggcggcttcttcgacgcgatcaggcaggat
ccgattctggccggcgtcaagctcattgccgaaccctgggacatcggcgagggcggctac
cagctcggcggctttccgccgcccttccgcgagtggaacgatcgcttccgcgacgatgtc
cgccgcttctggaagggagacggcggcgttgtgccggtgctggccgaacggctcgccggc
tcaccggtccagttcaatcattcgggccgcgccgccactacctccgtcaacctgttgagc
gcgcatgacggcttcacgctgatggatgccgtttcctacgcggagaagcacaacgaggcc
aatggcgaggacaaccgcgacggccattcggacaaccactccgacaatatgggcgccgag
gggccgaccgatgaccacaggatcgatgaggcgcgccgacggcgccgctttgctatgctt
gccaccctgatggtgagccagggcgttccgatggtcctcggcggcgacgagctcggcaac
agccagggcggaaacaacaacgcctactgccaggacaacgagatcggctggatcgattgg
agccggctggacgacaccttcctcgccttctgccggaagatcatcgctttccgccgggag
catccggtgctgcgccaggagaattttctggaaggcgccaccgacgagcatggacgcatc
gaggtcgcctggtacaagcccgacggcagccgcatggacgaggccgcatggggcgacggc
gaattgcgcatcctcggcgtctatctctgccacctctcgccggccgaggcaccggcggag
gagatgttcctcgtcttcaatgcgggcggcgactgcgacgttgcgctgccctccgtgcac
ggctcggaaatctggcaatgggcgctgaatacggccgaggacgatgccttcgtcgcgcag
cgtgccagggagcgggaaacgatccgggcgcagagcgtcgccgctttcgtccctcacgac
agcggcgggtaa
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