Sinorhizobium fredii NGR234: NGR_b11970
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Entry
NGR_b11970 CDS
T00888
Symbol
capD
Name
(GenBank) Capsular polysaccharide biosynthesis protein CapD
Organism
rhi
Sinorhizobium fredii NGR234
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GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
CoA_binding_3
3Beta_HSD
NAD_binding_4
ThiF
adh_short
Methyltransf_33
Motif
Other DBs
NCBI-ProteinID:
ACP22650
UniProt:
C3KRE2
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Position
pNGR234b:complement(1161882..1164077)
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AA seq
731 aa
AA seq
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MQRFYDAAKAVRDSFLMLPRRGALRSSAKMLLPVFGAGLDIGYRRLRGAVFSVQKYPALY
VADLGSAGVALAVALLLRYGFAELSARPETASVLLWSGAQYIAICAFVFPLSGLYSRNWK
YGSISDLLIILRAVLVTSLLLISLLFFSTRLVDMPRTVVPMQSLLLIAFLAAARLSFRAE
EIPLARPVFKNGRNKGADEHHVPLLLVGAGDAAELYLRALARDPNATHVPVACLDKNADQ
IGMSLRGVPIAGRVEDFEQVVAELEQINKRPRHVVFTEAPANFGETASDALLQSADRLGI
AVSRLSQLTELKHAKGDNPYELRSIELTDLLERPQAALDCEAIARLVRGRRVLITGAGGS
IGSELTTQVAACEPAEIVLVDNSEYNLYSIDMTLTETFPKLSPSSYLCSVRRSQRVEEIF
KRHRPELVFHAAALKHVPMVQMNPCEGVLTNVIGTMNVANAAKKYGTLAMVQVSTDKVVN
STSVMGGTKRLAELYCQALDLDGLQTGKGPRFMTVRFGNVLGSSGSLIPLFKRQLARGGP
LTVTDPCMTRFFMTIREAVELTLQASAYGFEKQLGQGEIFVLDMGEPVKIVDIARRMIRL
AGFTPDQDIEIKIIGCRPGEKLYEELFDESDKRTTSPVPGVLGAVPEPIPLSTLRDAFTR
LQRYAERGNDPAVGAVMRELLPRYEHDAGNTKPRAMKKKRSRLQPHSRSKAAAPRRQVYQ
RSARGGLRLPD
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgtttttacgacgccgcgaaggcagtgcgcgatagtttcctaatgttgccgaga
cgcggagcgctaagatcatcggccaagatgctgctgccggtattcggcgccggcctcgac
atcgggtatcggcgtctacgaggagccgtcttcagcgttcagaaatacccggccctctat
gttgccgaccttggctccgcaggcgtggcgctcgccgtggcgctgttgctgcgttacggc
tttgccgagctgagcgcgaggcctgaaaccgcctctgtgctgctgtggtccggtgcccag
tatatcgccatttgcgccttcgttttccccctgtccggcctctacagccgaaactggaaa
tatggctccatctccgatctcctgatcattcttcgcgcagtcctcgtgacgtctctattg
ctcatctcgctcctgttcttttcgacgagactggtcgatatgccgcgaaccgtcgtgccg
atgcagtcgctccttctgatcgccttcctcgcggccgcgcggctcagctttcgtgccgag
gaaatcccactggcgcggcccgttttcaagaacgggcgcaacaagggggcggacgaacac
cacgtcccgctgctgctcgtcggagcgggcgacgccgccgagctttacctgcgcgcactc
gcccgggatccgaatgccactcatgtaccggtggcctgcctcgacaaaaatgcggaccag
atcggaatgagccttcgtggcgtgccgatcgcgggccgggtcgaggatttcgaacaggtc
gtggcggaactcgagcagatcaacaagcggccgcgtcacgtcgtgttcaccgaagcgccg
gcgaatttcggcgaaaccgcgtcggacgcgctgctgcagtcggccgataggctcggcatt
gcagtgtcgcgcctgtcgcagctgaccgaactcaagcacgccaagggagacaatccctac
gaactgcggtcgatcgagctcaccgacctcctggagcgcccgcaagcggcgctcgattgc
gaggcgatcgcccgtctcgttcgtggccggcgcgtgctgatcaccggggccggcggatcg
atcggcagcgagctgaccacgcaagtcgccgcatgcgagccggcggagatcgtgctggtc
gacaattcggaatacaatctttattcgatcgacatgacgctcaccgagaccttcccgaag
ctgtcaccgtcgagttacctttgcagcgtccggcgcagccagcgcgtcgaggaaatattc
aagcggcaccggcccgagctggtcttccatgctgcagccctcaagcatgtgcctatggtg
cagatgaatccctgcgagggcgtcctcacgaacgtcatcggcactatgaacgttgccaat
gcggcaaagaaatacggcacccttgccatggtccaggtatcgaccgacaaggttgtgaac
tcgacaagcgtcatgggggggacgaagcgcctcgcggagctctattgccaggcgctcgac
ctggacggcctccaaaccggcaaaggtccgcggttcatgacagttcgcttcggcaacgtg
ctgggatcgagcggatcgctgatcccgctgttcaagcgtcagcttgcaagaggcggccca
ttgaccgtcaccgatccatgtatgacgcgctttttcatgacgatccgtgaggccgtggaa
ctgacgctgcaggcctcggcctacggctttgaaaaacaactcggacagggagagattttc
gttctcgacatgggcgagccggtcaagatcgtcgacattgcgcgccggatgatccggctg
gccggttttaccccggaccaggacatcgagatcaagatcatcggttgccggccgggggag
aagctctacgaggaacttttcgacgagagcgacaagcgcacgacgtctccggtgccgggc
gttctgggtgcggttccggagcccattcccttgtccactttgcgggacgccttcactcgt
ctgcagcgctatgcggagcggggcaacgatccggccgtcggggcggtcatgcgcgaactg
ctgccgcgctacgaacacgatgccggcaatacgaagcctcgcgccatgaagaagaagcgg
agccggctccagccgcatagccgcagcaaggccgcggctccacggcggcaagtctaccaa
aggagcgcccgcggcgggcttcggttgccggattag
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