Sinorhizobium fredii NGR234: NGR_b12330
Help
Entry
NGR_b12330 CDS
T00888
Name
(GenBank) oligopeptide ABC transporter
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NGR_b12330
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhi02000
]
NGR_b12330
Transporters [BR:
rhi02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
NGR_b12330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ACP22686
UniProt:
C3KRH8
LinkDB
All DBs
Position
pNGR234b:1204944..1206845
Genome browser
AA seq
633 aa
AA seq
DB search
MITRRTALAILASTALPKVLLAAAGGVDALAPLVAEGKLPPVNERLPKTPRVINVAAMGR
QPGRYGGTIRSLIGSAKDIRLMTIYGYARLVGYDETLNLHPDVLERYETVEDRIFTFHLR
EGHKWSDGTPLTAEDFRYCFEDVLLNEDLSPAGLPTAMVMDGQAAKFEIVDERTLRYSWA
VPNPDFLQKLAAPQPLVLAMPSAYLKQFHKKYQEEDKLKALMKEERVKKWHQLHQRMARS
YRPENPDLPTLDPWRNTTPLPAEQFIFERNPFFHRVDENGLQLPYIDKFVLSVSSSALIP
AKAGTGESDLQAAGIDFVDYTYLKDAEKRYPVKVKLWKKTSGSRLALLPNLNCADPVWRP
LLRDVRVRRALSLAIDRQEINKAVFYGLTKESADTVLPDSPLFRPEFANAWITHDPDQAN
ALLDQAGLAKRDSDGIRILPDGRRAQIVVETPGESTLDTDVLQLITDYWQKVGISLFIRT
SQRDTFRSRAVGGEITMSMWFGIDNGVPTADMNPGELAPTADDKLQWPVWGLNYISHGEM
GEAPDLEPVVELLDLLKRWRHSADDAERADIWRQMLTIYTDQVFSIGLVNGSLQPILVTT
KLRNMPEEALWGFDPTSYFGAYKPDTFWLEQDS
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
gtgattacccgaagaacagcactcgccatcctcgcgtccaccgctctgccgaaggtcctg
ctcgccgccgccggcggggtcgacgcactggcgccgcttgtcgcagaaggcaagcttccg
ccggtgaacgaacgcctgccgaaaacgccgcgggtgatcaacgtcgcggcgatgggcagg
caacccggccggtatggcgggacgatccgcagcctgatcggcagcgccaaggacattcgt
ctgatgacgatctacggctatgcccggctggtcggctatgacgagacgctcaatctccac
ccggacgtgctcgaacgctatgagacggtcgaggaccggattttcaccttccatctgcgc
gaggggcacaagtggtcggacggcacgccgctgacggcggaggacttccgctactgcttc
gaggacgtgctgctcaacgaggacctctcgccagccggcctgccgacggcgatggtcatg
gacggccaggcggcgaagttcgagatcgtcgacgagcgcacgctgcgctactcctgggct
gtgcccaaccccgacttcctgcagaaactggcggcgccgcagccgctggttctcgccatg
ccgtcggcctatctcaagcagttccacaagaaataccaggaagaggacaagctgaaggcg
ctgatgaaggaggagagggtgaagaaatggcaccagctccaccagcgcatggcgcgctcc
tacaggcctgagaacccggatctgcccaccctcgacccgtggcgcaataccacgccgctg
ccggccgaacagttcatcttcgagcgcaatccgttcttccaccgtgttgacgaaaacggc
ctgcagctaccctacatcgacaagttcgtgctgagcgtcagttcgtctgcactcattccg
gccaaggccggcaccggcgagagcgacttgcaggcggccggtatcgacttcgtcgactat
acctacctgaaggatgccgagaagcgctatcccgtcaaggtcaagctgtggaagaagacc
tccggctcccgcctggcgctgcttcccaatttgaattgcgccgacccggtgtggcggccg
ctgttgagagacgtgcgggtccgccgcgccctgtcgctggcgatcgacaggcaggagatc
aacaaggcggtcttctacgggctgacgaaggagagcgccgacacggtcctgccggacagc
ccgctgttccgaccggagttcgcgaacgcctggatcacccatgatccggaccaggccaac
gccctgctcgaccaggccgggcttgcaaagcgcgacagcgacggcatccgcatcctgccg
gatggccgcagagcccagatcgtcgtggagacgcccggcgaaagcacgctcgacaccgat
gtgctgcagctcatcaccgactactggcagaaggtcggcatctcgctcttcattcggacc
tcgcagcgcgacaccttccgcagccgcgccgtcggcggtgagatcaccatgtccatgtgg
ttcggcatcgacaacggcgtgccgacggcggacatgaatccgggcgaactcgcgccgaca
gccgacgacaagctgcaatggccggtctggggcctgaattatatttcgcacggcgaaatg
ggcgaggcgcccgacctggagccggtcgtcgagctgctcgacctgctcaagcgctggcgg
cattccgccgacgatgccgagcgggcagacatatggcggcagatgctgaccatctatacg
gaccaggtcttctcgatcggcctcgtcaacggctcgctgcagccgatccttgtcacgaca
aagctgcgcaacatgccggaggaggcgctttggggcttcgaccccaccagttacttcggt
gcctacaagccggatacgttctggctggaacaggatagctga
DBGET
integrated database retrieval system
