Sinorhizobium fredii NGR234: NGR_b12340
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Entry
NGR_b12340 CDS
T00888
Name
(GenBank) putative permease component of ABC transporter
KO
K02033
peptide/nickel transport system permease protein
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NGR_b12340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhi02000
]
NGR_b12340
Transporters [BR:
rhi02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
NGR_b12340
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Ortholog
Paralog
GFIT
Motif
Pfam:
BPD_transp_1
BPD_transp_1_N
Motif
Other DBs
NCBI-ProteinID:
ACP22687
UniProt:
C3KRH9
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All DBs
Position
pNGR234b:1206847..1207845
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AA seq
332 aa
AA seq
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MLRYILWRIAVMVPTLLIISALVFTIIELPPGDYFESYIAELRAQGEGVDMEQIDSLRQQ
YGFDQPPLLRYIYWVGGMLQGDFGYSFEYELPVSEVVGDRLWLTILVSFFTIIFTWIIAF
PIGIYAATNQYSWGDYGLSLIGLIGIAIPNFMLALILMYFANIWFGTSIGHLMDQKYLSE
PMSWAKAKSILEHIWIPVIIVGAAGTAGMIRRLRANLLDELQKQYVVTARAKGLSPTRTL
VKYPLRMALNFFISDIGSILPAIISGAEITAIVLSLETTGPMLIKALQSQDMYLAGSFLM
FLAFLTVIGVLISDLALAVLDPRIRLQGRSTK
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggtacattctctggcgcatcgcggtgatggtgccgaccctgctgatcatctcg
gcgctcgtcttcaccatcatcgaactgccgcccggcgactatttcgaaagctacatcgcc
gagctcagggcccagggcgaaggcgtcgacatggagcagatcgattcgctcaggcagcaa
tacggcttcgatcaaccgccgctgctgcgctacatctattgggtcggcggcatgctgcag
ggcgacttcggctattccttcgaatatgagctgccggtgagcgaagtcgtcggcgaccgg
ttgtggctgacgatcctggtctcgttcttcacgatcatcttcacctggatcatcgccttc
ccgatcggcatctatgcggcgaccaaccagtacagctggggcgactacggcctttcgctc
atcggcctcatcggcatcgccatcccgaacttcatgctggcgctgatcctcatgtatttc
gccaatatctggttcggcacgtcgatcggccatctgatggaccagaaatacctgtccgaa
ccaatgagctgggcgaaggcgaagtcgatcctcgaacatatctggatcccggtgattatc
gtcggcgccgcgggcacggccgggatgatccggcggctgagagccaacctgctcgacgaa
ttgcagaagcaatatgtcgtgaccgcaagggccaagggcctctcgccgacgcggacgctc
gtcaaatatccgttgcgcatggcgctcaacttcttcatctcggacatcggctcgatcctg
ccggcgatcatttccggggcggaaatcaccgcgatcgtgctgtcgctcgagaccaccggg
ccgatgctgatcaaggcgctgcagagccaggacatgtatctcgccggatcgttcctgatg
ttcctggcgttcctcaccgttatcggcgtcctgatttccgatctggcgctcgccgtcctc
gatcccagaattcgcctgcaaggcaggagcaccaagtga
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