Sinorhizobium fredii NGR234: NGR_b12350
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Entry
NGR_b12350 CDS
T00888
Name
(GenBank) putative transmembrane permease component of ABC transporter
KO
K02034
peptide/nickel transport system permease protein
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NGR_b12350
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhi02000
]
NGR_b12350
Transporters [BR:
rhi02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
NGR_b12350
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Ortholog
Paralog
GFIT
Motif
Pfam:
BPD_transp_1
OppC_N
Motif
Other DBs
NCBI-ProteinID:
ACP22688
UniProt:
C3KRI0
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Position
pNGR234b:1207842..1209017
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AA seq
391 aa
AA seq
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MTSPIPAPGEPLAHYVSTAPFDPYSVEVMTEEQVRVNQASQLRLMWWKFKRHRVALVSGI
FLAALYGMILICEFLAPYNLHTRNMDFIYAPPQRVHFFHEGSFVGPFVYGRTMQLDMDTL
KRNYADNPADVQPIRFFCRGDSYRFWGLFESNVHLACPAENGQMFLLGSDRLGRDVLSRI
IYGARISLTIGLLGITVSFVLGIVIGGLAGYHGGVFDLVVQRLIEVLQSIPSIPLWLSLA
AIMPATWSPILIYLGITVILGLLDWTGLARAVRSKLLALREEDYVLAAQLMGAKSSRIIG
RHLVPGFMSHLIATATISIPGMILGETALSFLGLGLRPPITSWGILLTEAKSVSVIAFYP
WLLFPTIPVILVILAFNFLGDGLRDAADPYK
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
gtgacgtcaccgattcctgcccccggcgagccgctagcgcattacgtgtcgacggccccg
ttcgatccctactccgtcgaggtgatgacggaggagcaggtgcgcgtcaatcaggcgtcg
cagttgcggttgatgtggtggaaattcaagcgccaccgggtcgcgttggtgtccggcatc
ttcctggcggcgctctacggaatgatcctgatctgcgagttcctcgcaccctataacctg
cacacccgcaatatggacttcatctacgcgccgccgcagcgcgtgcatttcttccatgaa
ggctccttcgtcggccccttcgtctatgggcggacaatgcagctcgacatggatacgctg
aagcggaactacgcggacaaccccgcggatgttcagccgatccgcttcttctgtcggggc
gacagttaccgcttctggggcctgttcgagagcaacgtgcatctggcctgcccggcggag
aacggccagatgttcctgctcggcagcgacaggttgggacgcgacgtcctgtcgcgcatc
atctatggcgcgcggatttccctgacgatcgggcttctcggcattaccgtcagcttcgtg
ctggggatcgtcatcggcggccttgccggctatcacggcggggtgttcgacctcgtcgtg
cagcgcttgatcgaagtcctccagtcgataccgagcattccgctctggctttcgctggcg
gcgatcatgccggcgacatggagcccgatcctcatctatctcggcataaccgtcatcctc
ggcctcctcgactggactggcctggcgcgtgccgtccgctcaaagctgcttgcgctccgg
gaagaggactacgtcctcgccgcccagttgatgggcgcgaaaagcagccgcatcatcggt
cggcatctcgtgccgggcttcatgtcgcatctcatcgccacggcaacgatctccattccc
ggcatgattctcggcgagacggcgctcagcttcctcggcctcgggctgcgcccgccgatc
accagctggggtattctgctgacggaggcaaagagtgtgagcgtgattgccttctatcct
tggctgttgtttccgactataccggtcattcttgtgatattggcgttcaacttcctggga
gacgggttgcgcgacgccgcagatccctacaaatag
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