Sinorhizobium fredii NGR234: NGR_b12820
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Entry
NGR_b12820 CDS
T00888
Name
(GenBank) probable spermidine/putrescine ABC transporter, permease protein
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NGR_b12820
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhi02000
]
NGR_b12820
Transporters [BR:
rhi02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
NGR_b12820
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Paralog
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
ACP22733
UniProt:
C3KRM5
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All DBs
Position
pNGR234b:complement(1268750..1269664)
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AA seq
304 aa
AA seq
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MATIASTEANETSRRTRSRGLWSALVAISYIQAAPLLLILGFFFVLPILTIIVVSFWDYD
FAGLYPDFLTMNYTDTLGSWVTWKTYLNTLKLTAITWALTLFIGFWVAYFLAFHIRTTTM
QMVLFLVCTVPFLTSNIIRMISWIPVLGRNGLVNSTLIELGIIPQPIEWLLYSDFAVVLA
MVHLNTLFMVTPIFNTLMRIDRSLIEAARDCGASSWQVLWNVVLPLAKPGMAIGSIFVVT
LVMADFSTVQVMSGGQSASVALMMKNQMSLLQYPAAAANAVVLLIVVLLMVAAILRVVDI
RKEL
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgatcgcttccacagaagcaaacgagacgagccggcgaacgcgaagccgcggc
ctttggtccgcgcttgtcgcgatatcctacatacaggccgcccctctcctcctgatcctc
ggcttcttcttcgtgctgccgatcctcaccatcatcgtcgtcagcttctgggactacgat
ttcgcgggcctctatcccgatttcctgacgatgaactataccgatacactcggctcctgg
gtcacctggaagacctatctcaacacgctgaagttgaccgccatcacctgggcgctgacg
ctcttcatcggcttctgggtcgcctatttcctcgccttccacatccgcacgacgacgatg
cagatggtgcttttcctcgtctgcaccgtgccgttccttacctcgaacatcatccggatg
atctcctggatcccggttctcggccgcaacggtctcgtcaactccaccctgatcgaactc
ggcatcattccgcagccgatcgagtggctgctttattccgatttcgccgtcgtgctcgcc
atggtgcatctcaacacgctgttcatggtgacgccgatcttcaacacgctgatgcgcatc
gaccgatcgctgatcgaggcggcgcgcgattgcggcgcgagcagctggcaggttctctgg
aatgtcgtcctgccgctcgcaaagcccggcatggcgatcggctcgatcttcgtcgtgacg
ctcgtcatggcggatttctcgaccgtgcaggtgatgtccggcgggcagagcgcatcggtc
gcactgatgatgaagaaccagatgtcgctgctgcaatatccggccgccgccgccaacgcg
gtcgtgctgctcatcgtggtgctgctgatggtcgcggcgatcctccgggtcgtcgatatc
cgcaaggagctctga
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