Sinorhizobium fredii NGR234: NGR_b12830
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Entry
NGR_b12830 CDS
T00888
Name
(GenBank) ABC transporter, binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NGR_b12830
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhi02000
]
NGR_b12830
Transporters [BR:
rhi02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
NGR_b12830
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Motif
Pfam:
SBP_bac_8
SBP_bac_6
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
ACP22734
UniProt:
C3KRM6
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All DBs
Position
pNGR234b:complement(1269836..1271134)
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AA seq
432 aa
AA seq
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MTSETKTATPAKGISRRTLLKTGAAAAGAIAGSGAITGFPTIWAQNPITLRQFGTGVSNI
NAIAEKCKEDLGITLEMTATDSDAAAQRAVTQPDSYDIADIEYWIAKKVFPSGVMQPMDV
SKIKFYDKIVPLFIDGKLKPESVVAQGTAPHTVGFVEAQDSKSFAKAPTQWMTLIPTIYN
ADTLGIRPDLVGREITTWADIMDPAFKGKTAILNIPSIGIMDAAMIMEALGNIKYADKGN
MTTDEIDATIDFLIKAKQDGQFRAFWKSFDESVNLMASGEVVIQSMWSPAVAAVRSKGIA
CKYQPLKEGYRAWGGGLGLAAHLQGAQLDAAYEYINWYLSGWVGAYLNRQGYYSAAMETA
KAHMSEDEWGFWVEGKPAKGDILSPEGKVMEKAGAVRDGGSFEERMGKVACWNSVMDEDR
YMVRRWNEFIAA
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgaccagtgaaacaaagactgccacgcccgcaaaaggcatatcgcggcgcacgctcctg
aagaccggggcggccgccgccggtgccattgccggctccggcgccattaccggcttcccg
accatctgggcgcagaacccgattacgctccgccagttcggcaccggcgtctcgaacatc
aacgcgatcgccgaaaagtgcaaggaagacctcggcatcacgctggagatgaccgcgacc
gattccgacgccgcggcccagcgcgccgtgacccagccggactcctacgacatcgccgac
atcgaatactggatcgccaagaaggtcttcccgtcgggcgtcatgcagccgatggatgtc
tcgaagatcaaattctacgacaagatcgtgccgctcttcatcgacggcaagctgaagccg
gagagcgtcgttgcccagggcaccgcgccgcacaccgtcggcttcgtcgaggcgcaggac
tccaagagcttcgccaaagcgccgacgcagtggatgacgctcatcccgaccatctacaat
gccgacacgctcggcatccgtccggatctcgtcggccgcgagatcaccacctgggccgac
atcatggacccggccttcaagggcaagacggcgatcctcaacatcccgtcgatcggcatc
atggacgccgccatgatcatggaggccctgggcaatatcaaatatgccgacaagggcaac
atgacgacggacgagatcgacgcaacgatcgatttcctcatcaaggcgaagcaggacggc
cagttccgcgccttctggaagtcgttcgacgagagcgtcaacctcatggcctccggcgag
gtcgtcatccagtccatgtggtcgccggccgtcgccgcggtgcgctcgaagggcatcgcc
tgcaagtaccagcctctgaaagagggttatcgcgcctggggcggcggcctcggcctcgcc
gcccacctccagggcgcccagctcgacgcggcctatgagtacatcaactggtatctctcc
ggctgggtcggcgcatacctcaaccgccagggctactactcggctgccatggagactgcc
aaggcccacatgtccgaggacgaatggggcttctgggtcgaaggcaagcccgccaagggc
gacatcctctcgccggaaggcaaggtcatggaaaaggccggtgccgtgcgcgacggcggc
tccttcgaggaacgcatgggcaaggtcgcctgctggaactcggtgatggacgaggaccgc
tacatggtccgccgctggaacgagttcatcgcggcttaa
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