Sinorhizobium fredii NGR234: NGR_b13140
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Entry
NGR_b13140 CDS
T00888
Name
(GenBank) putative cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi00450
Selenocompound metabolism
rhi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
NGR_b13140
Enzymes [BR:
rhi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
NGR_b13140
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
NGR_b13140
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GFIT
Motif
Pfam:
Aminotran_5
Cys_Met_Meta_PP
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ACP22765
UniProt:
C3KRQ7
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All DBs
Position
pNGR234b:complement(1302033..1303223)
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AA seq
396 aa
AA seq
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MSDVFDLERLRADTPGCAAGMHFNHSGASLPSQSTLTAMWDYLRKEANDGPMEAANSATS
LLEDVRADTAALIGAKPSEIAFLGSGSTAWGAAFSALPPLVAGDRILVGRQEWGGNLATM
QDAAARAGARIETIPVHEDGSIDAEALASMIDERVRLVSLTWLPANGGLINDAAAVGRVI
RAAGVPYFIDAGQALGQIPIDVAALGCDVLKAAGRKFLRGPRGTAILYVRQEFLPRLTPR
YLDVLSGPMVDGVVKIRNDARRFEAGEISPALIFGLGAAARQARTLGIAAIRDRIKILAN
GLRDNLRNFPNVTVRDLGIELSGIVSFTVEGIPATQVRAALAERQIAIGANGVPYTPLDM
IARGLDQIARASVSYLNTLPEIDRLSEAIADIARRA
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatgtattcgacctcgaaaggctgcgagccgatacgcccggctgtgcggccggc
atgcatttcaatcactccggcgcctcgctgccgtcgcaatcgacgctgacggcgatgtgg
gactatctgagaaaggaagccaacgacggcccgatggaggcggcgaatagtgccacgtct
cttctggaggacgtgcgcgccgacacggcggcactgatcggcgccaagccgagcgaaatt
gcgttccttggcagcgggtcgaccgcctggggcgccgccttctcggccttgccgccgctt
gttgcaggcgaccgcatcctcgtcggccgccaggaatggggcggcaatctcgccaccatg
caagacgccgcggcgcgggccggcgcgcgcatcgaaaccattccggttcacgaagacggc
agcatcgacgccgaggccctggcatcgatgatcgatgagcgcgtccgtctcgtgtcgctc
acatggctgcccgcgaatggcggcctgatcaacgatgcggcagcggtgggacgcgtgatc
cgggcggccggcgtcccctatttcatcgacgcgggccaggccctcgggcagatcccgatc
gacgtcgctgcgcttggatgcgacgtgttgaaggctgcgggccggaaatttctccgagga
ccgcgtggcacggcgatcctttatgtccggcaggaattcctcccgcggttgacaccgcgc
tatctggatgtgctctccgggccgatggtcgatggggtcgtcaagattcgcaacgatgca
cgccgcttcgaggccggcgagatttcgcccgcactgattttcggactgggcgctgccgcg
cgccaggcaaggacgctcggcatcgcggcgatccgcgacaggatcaaaattctcgcgaac
ggcctgcgcgacaatctgcgcaacttcccgaatgtgacggtgcgggatctcggaatcgag
ctctccggtatcgtctcattcaccgtcgagggcattccggcaacgcaggtgcgcgccgcc
ctggccgaaaggcaaatcgcaatcggcgcgaatggcgttccctatacgccgctcgacatg
atcgcgcgagggctcgaccagattgccagagcttcggtaagctatctcaacacgttaccg
gaaatcgaccgcctttcggaagcgatcgcggatatcgcgcggcgagcatga
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