Sinorhizobium fredii NGR234: NGR_b13410
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Entry
NGR_b13410 CDS
T00888
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi00521
Streptomycin biosynthesis
rhi00523
Polyketide sugar unit biosynthesis
rhi00541
Biosynthesis of various nucleotide sugars
rhi01100
Metabolic pathways
rhi01110
Biosynthesis of secondary metabolites
rhi01250
Biosynthesis of nucleotide sugars
Module
rhi_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NGR_b13410 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
NGR_b13410 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
NGR_b13410 (rfbC)
Enzymes [BR:
rhi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
NGR_b13410 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ACP22792
UniProt:
C3KRT4
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Position
pNGR234b:complement(1333870..1334409)
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AA seq
179 aa
AA seq
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MQFTQAELKGVWLIEPTPVIDDRGSFTRVFCEKEMADFGLATRFVQHSRSHSVRKGTLRG
LHFQEEPHTEVKLVSCACGAIFDVVVDLRPNSPTRNRWLGFELTPENMKQVYIPAGFAHG
FQTLTEDAEVSYLISQFYTPHAATGVRFNDPAFSINWPLMPTAMSERDRTWPLVRKLVS
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttacccaagcggaactgaagggtgtctggctgatcgagccgacaccggtgatt
gacgaccgaggttcgttcacgcgcgtcttctgcgaaaaggaaatggcagatttcgggctt
gcgacgcgctttgtccagcacagccggtcgcattccgtcaggaagggaaccttgcgggga
ctgcacttccaggaggagccgcataccgaggtgaagctcgtttcctgtgcctgcggcgca
atctttgacgtcgttgtggacctgcggcccaattcgcccacccgcaatcgctggctgggt
ttcgagctcacgcccgaaaacatgaaacaggtctacatcccagcaggcttcgcccacggg
tttcagacgctgactgaggacgccgaggtctcgtacctgatttcgcagttctacacgccc
cacgcggcgacgggtgtccgcttcaacgacccggccttttcgataaactggccgctgatg
ccgacggcgatgtcagaacgggacaggacatggcctctggtcaggaagctggtcagctag
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