KEGG   Sinorhizobium fredii NGR234: NGR_b13950
Entry
NGR_b13950        CDS       T00888                                 
Name
(GenBank) two component, sigma54 specific, transcriptional regulator, Fis family
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
rhi  Sinorhizobium fredii NGR234
Pathway
rhi02020  Two-component system
Brite
KEGG Orthology (KO) [BR:rhi00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    NGR_b13950
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:rhi02022]
    NGR_b13950
Two-component system [BR:rhi02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   NGR_b13950
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_lid_14 HTH_8 AAA_5 FleQ AAA_2 AAA_16 TadZ_N HTH_50 PDE8A_N AAA_22 AAA_3 AAA
Other DBs
NCBI-ProteinID: ACP22846
UniProt: C3KRY8
LinkDB
Position
pNGR234b:complement(1400189..1401523)
AA seq 444 aa
MSESRVLLVDDEEELRRSSAQALELAGFRVDTFASAERALEFISFSFSGVVISDIRMPGM
DGMTFLQRIREIDPEVPVILVTGHGDVQLAVRAMREGAYDFVEKPFTAQALAGTIRRALD
WRGLVLENRRLRAVAGKRDDIEQRLPGRSQVMVDLRYRVRAIGASDADTLIIGDTGAGKE
VVARALHDLSSRANSPFIAINCAALPENLIESELFGHEPGAFPGALRPRYGKFEHGRGGT
ILLDEIGSMPVDLQAKFLRVLQERVITRLGSNEHVPLDVRFIATSKLELEPEVAAGRFRA
DLLYRLNVATLRVPSLAERRSDIPLLFMQLVRESAARYGRDDIEISPTLASEMATRDWPG
NVRELRNAAERLVLGLETDAASPANGLRLADRVAAFEKSVIASAIAAHGGALKPVYESLG
ISRKTLYEKMQKLGLDKKSLTDEA
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgagtgaaagccgcgtcctgcttgtcgacgacgaggaggagcttcgtcgctcgagcgcg
caggcgctggagcttgccggcttccgcgtcgataccttcgccagcgccgagcgggcgctc
gaattcatcagcttcagcttttccggcgtcgtcatcagcgatatccgcatgccgggcatg
gacggtatgaccttcctgcagcggatccgcgagatcgacccggaagttccggtgatcctg
gtgaccgggcatggcgacgtccaactggccgtgcgggcgatgcgcgagggcgcctacgac
ttcgtcgagaaaccttttacggcgcaggcgctcgccggcaccatccggcgcgccctcgac
tggcgtggcctcgtgctcgaaaaccgacgcttgcgggccgtcgccggaaaacgcgacgac
atcgagcagcgcttgcccggacgaagccaggtcatggtcgacctgcgctaccgggtgcgc
gccatcggcgcatcggacgccgacacgctgatcatcggcgataccggcgccggcaaggaa
gtcgtcgcccgcgccctccatgatctgagcagccgggcaaacagccctttcatcgccatc
aactgcgccgcactccccgagaacctgatcgaaagcgagctcttcggccatgagcccgga
gcctttccgggtgcgctcaggccacgctacggcaagttcgagcacgggcgcggcggcacg
atcctgctcgacgaaatcggctcgatgcctgtcgatctccaggcgaaattcctgcgcgtg
ctgcaggaaagggtgataacccggctcggctcgaacgaacacgtgccgctcgacgtacgc
ttcatcgcgaccagcaagctggaactggagccggaggtcgccgcgggacgcttccgcgcc
gacctgctctatcgactgaacgtcgcgacgctgcgcgtcccgtctctggcggagcgtcgc
tccgatatcccgttgctcttcatgcagctcgtgcgagaatccgccgcccgctatggccgc
gatgacatcgagatctcgccgacgctcgcctctgaaatggcaacccgcgattggccaggc
aacgtccgcgaactgcgcaatgcggccgagcgcctggtgctcgggctggaaaccgatgca
gcctcgccggcaaacggcttgcgcctcgccgacagggtcgcggctttcgaaaaaagcgtc
atcgccagtgcgatcgcggcgcatggcggcgcactgaagccggtctatgaatcgctcggc
atctcacgcaagacgctttacgagaagatgcagaagctaggcctcgacaagaaatcgctg
acggatgaggcgtag

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