Sinorhizobium fredii NGR234: NGR_b14280
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Entry
NGR_b14280 CDS
T00888
Name
(GenBank) putative ABC transporter
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NGR_b14280
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhi02000
]
NGR_b14280
Transporters [BR:
rhi02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
NGR_b14280
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
SMC_N
AAA
Rad17
AAA_22
SRP54
ORC-CDC6-like
ABC_ATPase
Mg_chelatase
AAA_19
nSTAND3
AAA_14
RsgA_GTPase
CysA_C_terminal
AAA_16
nSTAND_NTPase5
AAA_29
AAA_5
AAA_28
Motif
Other DBs
NCBI-ProteinID:
ACP22879
UniProt:
C3KKE3
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Position
pNGR234b:1435631..1436662
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AA seq
343 aa
AA seq
DB search
MTLKLQDIEKTFGSFHAVKGVSFSLAQGEVLSLLGPSGCGKTTTLRMIAGFEQPTAGTIL
LANRDITHTAARHRNIGMVFQSYALFPHMSVADNVAFGLRMRGMARAKRDERVRTALDIV
RMGKFAERSPKQLSGGQQQRVALARALAIQPDILLLDEPLSALDLKLREEMRDEINRIVR
ELKITTVFVTHDQSEALVLSDYVAVMNGGVVEQLDTPTRLYRNPETPFVADFIGGANVVK
GAVAADTFKASGDIVIPLPCSADAAAKAIAIRPEDIRLSAPSAPGLSGVVEQSRFLGGTT
EYVVRVSPAVALTVRNESYQPFKNGDRVGLEVQPERIVCLRTN
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
gtgaccctcaagcttcaagatatcgaaaagaccttcggcagcttccacgccgtcaaaggc
gtaagcttctcgctggcgcagggcgaggttttgagcctgctcggaccgtccggctgcggc
aagacgacgaccttgcgcatgattgccggtttcgaacagccgacggccgggacgatcctg
ctggcaaatcgggacatcacgcacacggcggcgcggcaccgcaacatcggcatggtcttc
caatcctatgcgctgttcccgcatatgagcgttgccgacaacgttgccttcggcctgcgc
atgcgcggcatggcgcgcgccaagcgcgacgaacgggtgagaacggcgctcgacatcgtg
cggatgggcaagtttgccgagcggtcgccaaaacagctctccggcggccagcagcagcgc
gtcgccttggcacgggcactggcgatccaaccggacatcctgctgttggacgaaccgctt
tcggcgctcgatctgaagctgcgcgaggagatgcgcgacgagatcaaccgcatcgtccgg
gaactgaagatcaccacagtcttcgtcacccatgaccagagcgaagcgctcgtcctctcc
gactatgttgcggtgatgaacggcggggtcgtcgaacagctcgatacgccgacgcggctc
taccgcaatccggagacgccgttcgtggcggatttcatcggcggcgccaatgtcgtcaag
ggggcggtcgccgccgacacgttcaaggccagcggcgacatcgtcatacccttgccctgc
agcgccgacgcggcggcgaaggccatcgccattcgaccggaagacattcgcctttcggcg
ccgtcggcaccgggtctctccggcgtcgtcgagcagagccgcttcctcggcggcacgacg
gagtatgtcgtcagggtttccccggcggtggctctgacggtgcgaaacgaaagctaccag
ccgttcaagaacggcgatcgcgtcggtctagaggtccagcctgagcggatcgtctgcctg
cgtacgaattga
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