Sinorhizobium fredii NGR234: NGR_b16560
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Entry
NGR_b16560 CDS
T00888
Name
(GenBank) ABC transporter permease protein, putative
KO
K02053
putative spermidine/putrescine transport system permease protein
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NGR_b16560
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhi02000
]
NGR_b16560
Transporters [BR:
rhi02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
NGR_b16560
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Paralog
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
ACP23107
UniProt:
Q6W204
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All DBs
Position
pNGR234b:complement(1682566..1683384)
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AA seq
272 aa
AA seq
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MSVGKATPARWTLRIFAGVVLVFLMAPILAIIPLSFNSEPFFTYPMPGFSLRWYEAVFAS
VDWQLSARNSFIVAALATVLATALGTLAAIGLNRPDCPWRMALSAIIISPIVIPLVVAAV
GIFYFYADIGLLNTLTGLVLSHTALGAPFVMITVAATLAGFDHRLMRAAASLGAPPVTAF
RRVMLPIIMPGVVSGAIFAFVTSFDDVVVALFITGAEQKTLPRQMWSGLREQISPAITAV
ATLLIIVAAALMLTANALQARQQRINNPNSAH
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcggaaaagcaacgcctgcaaggtggacgctgcgtatattcgcgggcgtggtg
cttgtcttcctgatggctcccatcctggcaatcataccgttgtccttcaattcggagccg
ttcttcacatatcccatgcccggcttctcgctacgctggtacgaagccgtgttcgcctcg
gtcgactggcagctctcggcgcgcaacagcttcatcgtggctgcgctcgcgacggttttg
gcaaccgcgcttggcaccctggctgcgatcgggctgaaccgcccggactgtccgtggagg
atggcgctctcggcgatcatcatctcgccgatcgtcattccgctcgtcgttgccgcggta
ggcatcttctatttctacgcggacatcgggctgctgaatacgctgacaggtctcgtgctc
tcccatactgcactcggagcgccgttcgtgatgatcaccgtggccgcgactttggcgggt
ttcgatcaccgcctgatgcgcgccgcggccagtcttggagcaccgccggtgaccgcattc
cggcgggtgatgctgccaatcatcatgccgggtgtcgtctccggcgcaatcttcgcgttc
gtcacttcgtttgacgacgtcgtggtcgcgctgttcataaccggagccgagcagaagacc
ttgccccgacagatgtggagcggactgagagagcagataagtccggcgatcacagcagtc
gccacgctgctcatcatcgtcgctgccgctctcatgctgaccgcgaacgcactgcaagcc
cgccagcagcgcatcaataacccaaactctgcccactaa
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