Sinorhizobium fredii NGR234: NGR_b16570
Help
Entry
NGR_b16570 CDS
T00888
Name
(GenBank) probable permease of ABC transporter
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NGR_b16570
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhi02000
]
NGR_b16570
Transporters [BR:
rhi02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
NGR_b16570
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BPD_transp_1
Glyco_transf_28
Motif
Other DBs
NCBI-ProteinID:
ACP23108
UniProt:
Q6W205
LinkDB
All DBs
Position
pNGR234b:complement(1683381..1684643)
Genome browser
AA seq
420 aa
AA seq
DB search
MTHSYENTAIGTAGHVQAASALRIRLKRANRAGSFKALALVAPLLLFLSVTFLLPIGLLL
ARAVDNREVAQVLSHTTEQLAGWDMRATPSDDVYEALVRDLQSASRDRVAEVSKRLNYHS
PGFRTLMNRTVREAGNLTSENARAELLAINDKWGEVETWQIIKQASPALTDYYLLKAVDL
AKMPDGDIVTAKDDAIYTDVIVRTVVISLCVTVLCVLIGYPLAYLLATTDPVYSRWLLML
VLLPFWTSLLVRTTAWLVLLQSNGVVNSLLSWLGLISQPLELVHNRVGVLIAMTHILLPF
VVLPVHAVMKGIPDVYWRAASSLGAPAHKAFLRVYLPLTMPGVGAGALLVFILALGYYIT
PALVGGPKDQMLSYFIAYFVNQSSNWGMAAALAVVLLTLVVGLYLALVLAYGRSRAGAKP
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgacgcattcctatgaaaacacggcaatcgggacggcaggtcacgtacaggcggcatcg
gcgctccggatcaggctgaaacgggcgaaccgggcgggcagtttcaaggccttggccctc
gttgcgccgcttctccttttcctttcagtgacattcctgctgccgatcggtttgctcctg
gcgagagcggtcgacaaccgcgaagtcgcccaggtactctcccacacaacagaacagctc
gcagggtgggacatgcgggctactccctcggacgatgtctacgaggccctggtccgcgac
ttgcagtctgcctctcgagaccgcgtcgcagaggtgagcaaacggctcaactaccactct
ccgggctttcggactctcatgaaccgtacggtccgcgaagcaggcaatctcacttctgag
aacgctcgcgctgagctccttgcgatcaatgacaaatggggcgaggtcgagacctggcag
atcatcaagcaggcgtctcccgcgctaacggattactatctgctgaaagccgttgacctg
gcgaaaatgcctgacggtgacatcgtcacggcaaaagacgacgcgatctacaccgatgtc
atcgtccggacagtcgtcattagtctctgcgtgactgttttgtgcgtattgattggctac
ccgctggcatacctgctggccaccaccgatccggtctactcccgttggcttctgatgctc
gtgctgttgcccttctggacctccttgctggtccgaacgacggcctggcttgtcctgctg
cagagcaacggtgtcgtcaattcgctcctttcgtggctcggtttgatctcgcagccactg
gaactcgttcacaaccgcgtcggcgttctgatcgcgatgacccacatcctgctcccgttc
gtcgttctgcctgtgcatgcagtcatgaagggcatcccggatgtctactggagggccgcg
tcttctctcggcgcgcccgcgcacaaggcctttctgagagtgtacctgccgctaacgatg
cccggggtcggtgcaggggcactgctggtcttcatcctggcgctcggatactacatcacg
cccgcactggtcggcggacccaaggaccagatgctcagctacttcattgcgtatttcgta
aaccagtcgtcgaactggggcatggccgccgctctcgcagtggtgctcctgacccttgtc
gtcgggttatatctcgccctcgtccttgcctacgggcgcagccgtgcaggagccaagcca
tga
DBGET
integrated database retrieval system
