Sinorhizobium fredii NGR234: NGR_b16580
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Entry
NGR_b16580 CDS
T00888
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NGR_b16580
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhi02000
]
NGR_b16580
Transporters [BR:
rhi02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
NGR_b16580
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Paralog
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
ACP23109
UniProt:
Q6W206
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All DBs
Position
pNGR234b:complement(1684709..1685776)
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AA seq
355 aa
AA seq
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MQKVKNRAIGAVSMLALVATTAIATNVRAEDKLTIASWGGAYQDSQAKAYFDPFSQETGT
KIVTDEWSGETAKLKGMVETGNVSWDVVDVEPGHALQGCDEGWLEPIDYESLGGKDKFLP
GAALECAIGNVAFAYILAYDNAKFPNGGPTKVADIWDVKKFPGPRSLRKSPKSTLELALL
ADGVAPDDIYKVLETSEGVDRAFKKLDEIKPHVKVWWGAGAQPPQLLADGEVAVTTAYNG
RIYDAVKNSGKDFKIVWDGAALDWDMWAIPKGSPRVELAKKFVAFASRPENLAQQTKYIP
YGPSNIEAAGFVDASVLPNLPTSPENSKTSFSISAQFWADHDEELTERFNTWLAQ
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaagttaaaaacagggcaatcggcgcggtgtcgatgcttgcgcttgtcgcaacg
accgccatcgccacgaacgtccgggccgaggacaagctgacgatcgcctcgtggggaggc
gcctaccaggacagccaggcgaaggcctatttcgatccgttttcacaggaaacgggcacg
aaaatcgtaaccgatgaatggagcggtgagactgccaagctcaagggcatggtggagacg
ggcaacgtgagttgggatgtcgtcgacgttgaaccgggccacgccctgcagggttgcgac
gagggatggcttgaaccgatcgactatgagtcgcttggcggaaaggacaagtttcttccg
ggggccgccctggaatgtgcgatcggcaacgtcgcgttcgcctacattcttgcctatgac
aacgccaagtttccgaacggcggcccgaccaaggttgccgatatctgggacgtcaagaaa
ttccccggcccacggtcgttgaggaagtctcccaaatcgaccctcgagcttgcacttctg
gccgacggcgtagctccggacgacatctacaaggtgctcgagacgagcgaaggcgtcgac
cgggcgttcaagaagctcgatgagatcaagccgcacgtgaaggtctggtggggcgctggt
gcacaaccgccgcagctcctggcggatggggaagtcgccgtaaccacggcttacaacggc
cggatttacgacgccgtcaagaacagcgggaaagacttcaagatcgtctgggacggtgcg
gcccttgactgggacatgtgggcgattcccaagggtagcccgagggtagagctcgccaag
aagttcgtcgccttcgccagcaggcccgagaacctggcccagcagacgaagtatatccct
tacggtccgtccaacatcgaggccgcgggatttgtcgatgcttccgtcctcccgaatctg
cctacctcgccggagaactcgaagacctcgttctcgatctccgcgcagttctgggcggat
catgacgaggagctgaccgagcgcttcaacacctggctcgcacagtaa
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