Sinorhizobium fredii NGR234: NGR_b16990
Help
Entry
NGR_b16990 CDS
T00888
Name
(GenBank) probable polyamine ABC transporter, permease protein
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NGR_b16990
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhi02000
]
NGR_b16990
Transporters [BR:
rhi02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
NGR_b16990
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
ACP23150
UniProt:
Q6W250
LinkDB
All DBs
Position
pNGR234b:complement(1730728..1731603)
Genome browser
AA seq
291 aa
AA seq
DB search
MLSRTDAKAAGSNVPARRLTLTDFDLTLPALGLLVLFFVVPVAILLARSVSEPVPGLGNY
AELLGSSTYLRIFANTFLVSGLVTFVSLLIGFPVAWALAVMPSRFASVVFAILLLSMWTN
LLARTYAWMVLLQRTGVVNKLLIGLGLIDKPLPLVNNLTGVTIGMTYIMLPFIILPLYGV
IRKIDPAILQAAALCGANRWQSLVRVLLPLAMPGMAAGALMVFVMSLGYFVTPALLGGTA
NMMLAELIAQFVQSLVNWGMGGAAALVLLVVTLALYAVQLRFFGTDRMGGR
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcgcgcaccgacgcgaaggcggcaggatcgaacgtccccgcgcgccgcctgacg
ctcaccgacttcgacctgaccttgccggcgctcggcctcctggtcctgttcttcgtcgtg
ccggtcgccatcctgctggcgcggagcgtctcggagcccgtaccgggcctcggaaactat
gccgaactgctgggctcctcgacctatctcaggattttcgcgaacaccttcctggtgtca
ggcctggtcaccttcgtgtcgctgctcatcggctttcccgtcgcctgggcgctggcggtg
atgccgagccgcttcgcttcggtggtcttcgccatcctgctcctgtcgatgtggaccaat
ctcttggcgcgcacctatgcctggatggtgctcttgcagcgcaccggcgtcgtcaacaaa
ctcttgatcgggctgggtctcatcgacaagccgctgccgctcgtcaacaacctgaccggc
gtgacgatcggcatgacctatatcatgctgcccttcatcatcctgccgctctatggcgtc
atccggaagatcgatccggccatcctgcaggcggcggcgctctgcggcgccaaccgctgg
caatcgctcgtgcgtgtcctcctgccgctggcaatgcccggcatggcggccggcgcgctg
atggtcttcgtcatgtcgctcggctacttcgtcacccccgcgctgctcggcggcacggcg
aacatgatgcttgccgaactgatcgcgcaattcgtccagtctctcgtcaattggggcatg
ggcggtgcggcggccctggtgctcctcgtcgtcaccctggcgctctatgcggtgcaactg
cgcttcttcggcaccgaccggatgggaggacgctga
DBGET
integrated database retrieval system
