Sinorhizobium fredii NGR234: NGR_b17670
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Entry
NGR_b17670 CDS
T00888
Name
(GenBank) putative substrate-binding component of ABC transporter
KO
K17241
alpha-1,4-digalacturonate transport system substrate-binding protein
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NGR_b17670
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhi02000
]
NGR_b17670
Transporters [BR:
rhi02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Alpha-1,4-digalacturonate transporter
NGR_b17670
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_1
SBP_bac_8
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
ACP23218
UniProt:
Q6W2B6
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All DBs
Position
pNGR234b:complement(1799078..1800355)
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AA seq
425 aa
AA seq
DB search
MSKLFSGVSALVLAGFVGVGAAHAESKTITFLFTDDDQGYVERMAALSKEFESTHPDVKV
NFVSSGYDAVAKQLPVQLAVGEGPDLAKITDWQLAPYYLDMRPYMKDPEAYAKLHGASLD
QLRLPNINEPNSINGYVASQTLNLPFVNKTLFEQAGEPLPGPKATLKEIVEASARVAKAT
GVQVPFTMDRSGHRFSGAAFSYGATYVKDGRFSFPDEAAKKYIADVYSWTQDGSFPKEMW
GAAGGSQYKNMGDEFVNGNVVTYLAGNWMVNPFQTKIGDAFDWTAINAPCGEAGCYAMPG
ATAIVGFKRTKHPEAVAEFIEFLGSEKIQREIAENYVILTGADIKDPQYKLSSENAKSAM
AVFLDNKKNVPQAARDFERQKGGSAMYQQIVQRMSQLIVGELSLEETYKVLEDDVRKINE
ARASQ
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagctcttttcaggcgtaagcgcactggtactcgccggttttgtcggagtgggt
gcggctcatgccgaatccaagacgatcacctttctgttcaccgatgacgaccagggctat
gtcgagcgcatggccgcgctcagcaaggaattcgagagcacccacccggacgtgaaggtc
aatttcgtttcgtcgggctacgatgccgtcgccaagcaattgccggtgcagcttgcggtc
ggcgagggtcccgatctcgccaagatcaccgactggcagctcgcgccctactacttggac
atgcgtccctacatgaaggacccggaggcttacgcaaagctccacggcgcaagccttgac
cagctccgcctgccgaacatcaacgagccgaattcgatcaacggctatgtggcgtcgcag
acgctcaacctgcccttcgtcaacaagacgctgttcgagcaggccggcgagcccctgccg
gggccgaaggcaacgctgaaggaaatcgtcgaagcctcggcgcgggtcgcaaaggcgacg
ggcgtgcaggttccgttcaccatggaccgctccggccaccgcttctcgggtgcggccttc
tcctacggtgcgacctatgtgaaggacggcaggttcagcttcccggacgaggcggcgaag
aaatacatcgccgacgtctattcctggacccaggacggcagcttccccaaggagatgtgg
ggcgcggccggcggatcgcagtacaagaacatgggtgacgagttcgtcaacggcaatgtc
gtgacctatctggccggcaactggatggtcaatccgttccagacgaagatcggcgacgcc
ttcgactggacggcgatcaatgcgccctgcggcgaggccggatgctacgccatgcccggc
gccacggcgatcgtcggcttcaagcgcacgaagcatcccgaggcggtggccgagttcatc
gagttcctcggctccgagaagatccagcgggagatcgccgaaaactacgtcatcctgacc
ggtgccgacatcaaggacccgcaatacaagctttcgagcgagaacgccaagtccgccatg
gcggtgttcctggacaacaagaagaacgttccgcaggcggcgcgcgacttcgagcgccag
aagggcgggtcggcgatgtaccagcagatcgtgcagcgcatgagccagctgatcgtcggc
gagctgtcgctcgaggaaacctacaaggtcctggaggatgacgtccgcaagatcaacgaa
gcgcgggcgtcccagtaa
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