Sinorhizobium fredii NGR234: NGR_b17740
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Entry
NGR_b17740 CDS
T00888
Name
(GenBank) putative LacI family transcriptional regulator
KO
K03604
LacI family transcriptional regulator, purine nucleotide synthesis repressor
Organism
rhi
Sinorhizobium fredii NGR234
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rhi03000
]
NGR_b17740
Transcription factors [BR:
rhi03000
]
Prokaryotic type
Helix-turn-helix
LacI family
NGR_b17740
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_10
HTH_3
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
ACP23225
UniProt:
Q6W2C3
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Position
pNGR234b:complement(1808808..1809848)
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AA seq
346 aa
AA seq
DB search
MDRKTNLKDVAREAGVSLSTASHALNGTAPLTVEVRERVLESARRLGYLESRRKKATIAT
VRVVLLALTSDAAPQSDLNMVSWTILNGVRRECERRGIRIVPFVSASTRLDPAEVRQAAE
VENVDGILVLNDDRPELIRALSVLDKSMVILNGEDPSMLVDTVTVENRFGARLGTEHLLS
LGHRRILHLTWQGRTTIRRRYDGYVDAHLVAGLPAPENMVVVAESYEPRHGKQVIRALLQ
ADRKLRGVTAIFCAADNLALGCLEALAEAGIRVPEDISVLGFDDIVPGEFSAPPLSTIQM
PADRLGAAALSLLEQRLIANDPLRPAHRLELGCRLILRGSIAPPRR
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
gtggatcgaaaaaccaatctcaaggatgtcgcgcgcgaggcgggagtttcgctcagcacg
gcgtcgcacgccctcaacggcaccgcgccgttgactgtcgaggtgcgcgagcgggttctc
gaatccgcacgccggctcggctatctcgaaagccggcggaaaaaggcgacgatcgcgacg
gtgcgcgtcgtgctgctcgccttgacgagcgacgcggcgccgcagagcgacctcaacatg
gtgagctggacgatcctcaatggcgtgcggcgcgaatgcgagaggcgaggaatccgcatc
gttcctttcgtcagcgccagtacccgcctcgatccggccgaggtgcgccaagcggctgag
gtcgagaacgtcgacggcatcctcgtcctcaacgacgacaggccggaactcatccgggcg
ctttccgtgctcgacaagtcgatggtcatcctcaacggcgaggacccctcgatgctggtc
gataccgtgacggtcgaaaaccgtttcggggcgcggctcggcaccgagcatctgctgtcg
ctcgggcaccgccgcatcctgcacctgacgtggcagggacgcacgacgatccggcggcgc
tacgacggatatgtggatgcgcatctggtagccggcctgccggcgccggagaacatggtc
gtggtcgcggaaagctacgagccgcgccacggcaaacaggtgatccgcgcgctcttgcaa
gcggaccgaaagctccggggcgtcacggcaatcttctgtgcggccgacaacctggcgctc
ggctgcctggaggcgcttgccgaggccggcattcgcgtgccggaagatatatcggtgctc
ggtttcgacgacatcgtgccgggcgagttcagcgcgccgccgctcagcaccatccagatg
ccggccgatcgcctgggtgcggcggcgctctcgctcctcgagcaacgcctgatcgccaac
gatccgctgcgtcccgcccatcggctcgagcttggctgccggctgatcctcaggggcagc
atcgcgccgccgcggcggtag
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