Sinorhizobium fredii NGR234: NGR_b19250
Help
Entry
NGR_b19250 CDS
T00888
Name
(GenBank) probable RND efflux transporter
KO
K07788
multidrug efflux pump
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NGR_b19250
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhi02000
]
NGR_b19250
Transporters [BR:
rhi02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
NGR_b19250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
DUF4262
DUF5959
Motif
Other DBs
NCBI-ProteinID:
ACP23372
UniProt:
C3KLT6
LinkDB
All DBs
Position
pNGR234b:1962669..1965800
Genome browser
AA seq
1043 aa
AA seq
DB search
MSISEFCIRRPVATLLMSLALVFAGLFAYAALPVAALPRTEFPVINVSAALPGASPETMA
TSVATPLIKQFDTIAGIDSISTNNSLGSTSISIQFALDRDIDAAAADVQAAITRTLRTLP
QDVPSPPSFRKVNPADAPVLLLALKSDTVPLTKLDAFAQQVISPSLSTLEGVAEVSIFGS
QQFAVRIELDPDALAARGISLAELQSAIAAANDNSPLGTVQSTGRQMTIIADTQLQNAAA
FSKVIIKTADGKAVRLGDVTKVIDSVANTQTASWHDGARAIILAIQRQPDANTVAVVDKV
KSMLPTFQQSLPAGASLETLNDRSVSVRGAVDDVEFTLGLTIGLVILVIFVFVRRLSATL
IPALAVPISIIATFAAMYALGFSIDNISLMALTLSVGLVVDDAIVMLENIVRHMEETGQN
AFEAAIAASGEIGFTIIAISLSLVAVFIPVLLMGGVIGKIFDEFAIVVTISILASAFVSL
TLTPMLAARLPHKPAEPDDRHGPDALLERGFDVLLRGYERLLTLCIRARLAVLVLFLASI
GVTVYQVSATPKGFFPQEDIGQLQVTTQARTDISFAAMSALQAKVENVFARSPYVAHVAS
SIGSGGAGSSALNSGRLFVELKPKNERPSLPRILSELRPALASIAGIKSSITPVQNLSVG
ARSSASQYQLVVQGLDQAAMNAWANKLTEAMRADRAFFTDVSTDLENNAPQARLVVDRDK
AAALGISTDVLRTTLYGGFGSEQISTIYTSGDSYEVIMEVDPARSWSAASLAELQVPTAD
NRLVPLGAFARVDTVPGPLTVNQLGQLPAVTISYNLPTGVALGNSVEEIGRLKAEISMPQ
DVTTRFYGTAQLFQDAASNQAWLILGAILTIYIVLGILYESFIHPLTILSGLPSAASGAL
VAISLGGFDLSIIAVIGLLMLIGIVKKNAIMMIDVALSLQRNGMPAAEAIHRACLMRFRP
ILMTSLAALMGTLPIALGSGASAELRQPLGVAVVGGLLVSQPLTLFVTPVIYLYMESLAD
GIKRLFGYSAVRLIRRTKVAVAL
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatttccgaattctgcattcgccgcccggtcgcaacgctgctgatgtcgctggcc
ctcgtcttcgccggtctctttgcctatgcggcccttcccgtcgcggcgctgccgcggacc
gagtttccggtgatcaacgtctcggcggctctccccggcgcttcgccggagacgatggcg
acctccgtcgcaaccccgctcatcaagcagttcgacaccattgccgggatcgacagcata
tcgacgaacaactcgctcggctcgacgtcgatctccattcagttcgcgctcgaccgagat
atcgatgcggcggctgccgacgtccaggcggcgattacccggacgctacgaaccctgccg
caggacgtgccctccccgccgagcttccgcaaggtcaacccggccgatgcgccggtgctg
cttcttgccctgaagagcgacaccgtgccgctcaccaagctggatgcctttgcccagcag
gtgatctcgccgtcgctttccaccctcgaaggtgtcgcggaagtctcgatcttcggcagc
cagcaatttgccgtgcggatcgagctcgatcccgacgcgctcgccgcgcgcggcatctcg
ctcgctgagctgcagagcgccattgccgcggccaacgacaattcgccgctcggcacggtg
cagtcgaccggacggcagatgaccatcattgccgacacccaactgcagaatgccgccgcc
ttttccaaggtgatcatcaagacagccgatggcaaggcggtccggctgggcgacgtcacc
aaggtcatcgactcggtcgccaatacccagacggcgagctggcatgacggcgcgcgggcg
atcatcctcgccatccagcgccagcccgatgccaatacggtggcggtcgtcgacaaggtc
aagtcgatgctgccgacattccagcaatcgctgccggcaggagcgtcgctcgaaacgctc
aacgaccgttccgtctcggtgcggggcgcggtcgacgacgtcgaattcaccctcggcctg
acgatcgggctggtgatcctggtgatcttcgtcttcgtgcgccgcctgtcggcgacgctc
attccggcgctggccgtgccgatctcgatcatagccaccttcgcggcgatgtatgcgctc
ggcttttcgatcgacaacatctcgctgatggccctgacgctctccgtcggcctcgtcgtc
gacgacgccatcgtcatgctggagaacatcgtccggcatatggaagagacgggacagaac
gccttcgaggcggcgatcgccgcgtcaggcgagatcggtttcaccatcatcgccatctcg
ctgtcgctggtcgccgtcttcatcccggtcctgctgatgggcggcgtgatcggcaagatc
ttcgacgagttcgcgatcgtcgtcaccatctcgatcctcgcctccgctttcgtctccctg
acgttgacgccgatgctggcggcccgtttgccccataagcccgccgaaccggacgaccgg
cacggccccgatgcgctgctggagcgcggtttcgatgtgctgctgcgcggctacgagcgg
ttgttgacattgtgcatccgcgctcgccttgccgtgctcgtcctgttcctggcgagcatc
ggcgtgacggtgtatcaggtcagcgccacgccgaaggggttcttcccgcaggaggatatc
ggccagcttcaggtgacgacgcaggcgcggacggatatttccttcgcggccatgtcggcc
ctgcaggccaaggtcgaaaacgtgttcgcccgctcgccctatgtcgcccacgtggcaagc
tcgatcggctcgggcggcgccggatcgtccgccttgaactccggaaggctcttcgtagaa
ttgaagccgaagaacgagcgcccgtcgctcccccggattctttccgaactgcgtccggcg
cttgccagtatcgccggtatcaagtcttccatcaccccggtacagaatctctccgtcggc
gcacgcagttccgccagccagtatcaactcgtcgtccagggcctcgaccaggcggcgatg
aacgcgtgggcgaacaagctgaccgaggcgatgcgggccgaccgcgccttcttcaccgat
gtcagcacggacctcgagaacaacgccccgcaggcgcgcctcgtcgtcgaccgcgacaag
gcggcagccctcgggatttcgacggatgtactgcgcacgacgctttatggcggcttcggc
tcggaacagatctcgaccatctacacctccggcgacagctacgaggtcatcatggaagtc
gacccggccagaagctggtccgccgcctcgcttgccgaactgcaggtgccgaccgccgac
aacaggctggtgccgctcggcgccttcgcgcgcgtcgatacggttccgggcccgctgacg
gtcaaccaactcgggcaattgccggcggtgaccatctcctacaacctgccgaccggcgtg
gcgctcggcaacagcgtcgaggagatcggccgcctgaaggccgagatcagcatgccacaa
gacgtgacgacccggttctatggcaccgcgcagctcttccaggatgccgcttccaaccag
gcctggctgatccttggcgccatcctgacgatctatatcgtgctcggcatcctctatgag
agcttcatccacccgctgacgatcctgtccggcctgccgtcggcagcctccggggcgctc
gtggcgatcagcctcggcggattcgacctgtcgatcatcgcggtgatcgggctgttgatg
ctgatcggcatcgtcaagaagaacgcgatcatgatgatcgacgtggcgctgtctctgcag
cgcaacggcatgcctgccgcggaggcgatccaccgggcatgtctgatgcgcttccggccg
atcctgatgacgtcgctggccgcgctcatggggacactgccgatcgcgctcggcagcggc
gccagcgcagaactgcgccagccgctgggcgtcgccgtcgtcggcggcctgctcgtctcg
cagccgctgacgctgttcgtgacgccggtgatctatctctacatggagagcctcgccgac
ggcatcaaacggctgttcggctacagcgccgtgcgtcttattagacgcacaaaggtcgct
gtagcactttga
DBGET
integrated database retrieval system
