Sinorhizobium fredii NGR234: NGR_b19590
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Entry
NGR_b19590 CDS
T00888
Symbol
glcD1
Name
(GenBank) glycolate oxidase, subunit GlcD
KO
K00104
glycolate dehydrogenase FAD-linked subunit [EC:
1.1.99.14
]
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi00630
Glyoxylate and dicarboxylate metabolism
rhi01100
Metabolic pathways
rhi01110
Biosynthesis of secondary metabolites
rhi01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NGR_b19590 (glcD1)
Enzymes [BR:
rhi01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.99 With unknown physiological acceptors
1.1.99.14 glycolate dehydrogenase
NGR_b19590 (glcD1)
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Motif
Pfam:
FAD-oxidase_C
FAD_binding_4
LPAM_MltD
Motif
Other DBs
NCBI-ProteinID:
ACP23406
UniProt:
C3KLX0
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Position
pNGR234b:complement(2002459..2003916)
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AA seq
485 aa
AA seq
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MSSIAMPEPNADILARAPHIVAALEAALPAGAVISSPEETRAYECDALTAYRCPPLAVVL
PRTTEEVAVAMRICHVWSVPVVPRGAGTSLAGGALPTADSVVIGTMRLRDTLEIDTANRF
IRVQTGVTNLSVSAELEAEGFFYAPDPSSQLACTIAGNIAMNSGGAHCLKYGVTTNNLLG
VRMVMATGDIIEIGGPLLGTPGLDLLGLICGSEGQLAIVTEATLRIVPKPEGARPMLIGF
DSAETAGECVARIIRSGLLPVAIEYMDDVCLRAVEAFVKAGYPNCAAVLIVEVEGSEAEI
DHQIERIRSIAEELDPVEFRSSRTAEESLAIWKGRKSAFGAMGRLGDYLCLDGTVPVSRL
PHTLKRIGELSKEYGLEVANVFHAGDGNMHPLILFNANAPGELERAEAFGADILRLCVDV
GGCLTGEHGVGIEKRDLMTKQYTAEDMAIQMEIKDVFDPGWLLNPAKVFPLELSQAHRDA
AARCP
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccatagctatgcccgaaccaaacgccgatatccttgcgagagcaccgcatatc
gtagcggcgcttgaggctgcgctaccggccggtgctgtcatctcaagcccggaggaaacg
cgtgcctacgaatgcgacgcgctgacagcgtatcgttgcccgcctcttgccgtcgttctg
ccgcgcacaaccgaggaagtggcggttgccatgcgcatctgccatgtgtggagcgtaccc
gtcgtgccgcgtggggcaggcacgtcgctggccggcggcgctctgccgactgctgacagc
gtggtcattggcaccatgcgtttgcgcgacacattggagatcgacaccgccaaccgtttc
attcgtgtgcagacgggcgtcacgaatctctcggttagcgctgaattggaagccgagggc
ttcttctacgcaccggacccctcgtcacagcttgcttgcacgatcgcaggcaatatcgcg
atgaattccggtggcgcgcactgcctcaaatacggggtcacgacgaacaatctcttggga
gtccggatggtcatggccaccggcgacatcattgaaattggcggccccctcctgggtacg
ccagggttagaccttcttggcctgatttgcggatcggagggtcaactcgccattgttacc
gaagcgaccctccggatcgtcccgaagccggaaggtgcgcggccaatgttaatcgggttc
gacagcgccgaaacggctggcgaatgcgtggcgcgcatcatccgctcgggtctgttgccg
gtcgcgatcgaatatatggacgacgtttgcctgcgtgcggtcgaggccttcgtcaaagcg
ggctatccgaattgcgcagccgtactgattgtcgaggtggaaggctccgaggcggaaatc
gaccatcaaatcgagcgcatccgttcgatcgccgaggagcttgatccggtcgagttccgt
agcagccgaactgctgaggagtccttggcgatctggaaggggcgtaaatccgcgttcggg
gcaatgggccggctcggtgattatctgtgtctcgatggaaccgtgccggtctccaggctc
ccccacacgctcaagcgcatcggtgagctatcaaaggagtatggcctggaagtcgccaac
gtttttcacgccggcgatggcaatatgcacccgttgatcctcttcaatgcaaacgcgccc
ggcgagcttgagcgggccgaagccttcggcgcggacattcttcggctgtgcgtggacgtt
ggaggctgcctcaccggcgagcatggggtcggaatcgaaaaacgcgacctcatgaccaag
caatatacggccgaggacatggccattcagatggaaatcaaggatgtcttcgatcccggc
tggctgcttaatccagccaaggttttcccactcgagcttagtcaggcacatcgtgacgcg
gcggcgagatgcccatga
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