Sinorhizobium fredii NGR234: NGR_b19650
Help
Entry
NGR_b19650 CDS
T00888
Name
(GenBank) putative transcriptional regulatory protein, LacI family
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
rhi
Sinorhizobium fredii NGR234
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rhi03000
]
NGR_b19650
Transcription factors [BR:
rhi03000
]
Prokaryotic type
Helix-turn-helix
LacI family
NGR_b19650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_3
HTH_31
TetR_N
HTH_Tnp_ISL3
HTH_26
SpoIIID
HTH_7
MerR
SAM_GIDA_C
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
ACP23412
UniProt:
C3KLX6
LinkDB
All DBs
Position
pNGR234b:complement(2011305..2012345)
Genome browser
AA seq
346 aa
AA seq
DB search
MWRLRNWPRAEIDRIELCMSKPPTIRDVARLSGVSTATVSRYFTGKTDAISPETIENVRN
AAKVLGYTPSEIGRSLRLARSRVVVMLVPDATNPFTADVAASVEQALKEYGLSMVLANAS
ENAEQQDRLLADAQGLRARAIVLQGAIDTPRLRDMASRQDNLIFVNRRPAPGIVAPYVGI
DNFAAGFAVGKYFVDRGYENYVAIHGPRHYSGSTERLDGFLAGLGEMRPVLQFESPYTME
AGYRQGQLLLADRSRRYAVFCGNDMIAYGVYRAALEKDIRVPEDLVIFGFDDNRLNEWLA
PWLSTVKVPAFEFGPAIAKLINAPIATNDQDRNVILPFTMMTRTSA
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
ttgtggaggcttcgcaattggccgcgggccgagatcgatcgaattgagctgtgtatgagt
aagccgccgaccatccgcgacgtagcacgcctttccggcgtatcaaccgccaccgtgtcg
cgctatttcaccggaaagacggatgcgatttcgcccgaaacgatcgagaatgtgcgcaac
gccgcgaaggttctcggttacacgccgtcagagatcggccgctctcttcgcttggcgcgc
agtcgggttgtcgtaatgttggtacccgatgcgaccaatccatttaccgccgacgttgcg
gcgtcggtcgaacaggcgctcaaagagtatggcctatcgatggtgttggcgaatgcttct
gaaaacgccgaacagcaggatcggctgctggccgacgctcagggcctgcgggctcgggca
atcgtcctccagggcgcgatcgatacgccgcggctgcgtgacatggcatcgcgtcaggac
aacctaatctttgtcaaccgccggccggctccagggattgtcgctccctacgtaggcatt
gataacttcgcggcaggcttcgcggtcggcaagtacttcgtagatcgcggttacgagaac
tacgttgcaatccacggcccgagacattactcgggcagcaccgagcggctcgacggcttt
ctcgcaggcctcggagagatgcgtcccgtgcttcaatttgagagcccgtacacaatggag
gcgggctaccggcagggccagttgctcctcgctgaccgcagccgccggtacgcagtcttt
tgtggcaacgacatgatcgcctacggcgtataccgggcggcgctggagaaagacatccgc
gtgcccgaggatctggtcatttttggcttcgacgataaccggttgaacgagtggctcgct
ccctggctctcgacagtgaaggttccagcattcgaattcgggcccgccattgcaaagctg
atcaatgcgccgatcgccacgaatgaccaagacaggaacgttattctcccgtttacgatg
atgactcggacgtctgcctag
DBGET
integrated database retrieval system
