Sinorhizobium fredii NGR234: NGR_b20880
Help
Entry
NGR_b20880 CDS
T00888
Name
(GenBank) transcriptional regulator, XRE family
KO
K21686
XRE family transcriptional regulator, fatty acid utilization regulator
Organism
rhi
Sinorhizobium fredii NGR234
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rhi03000
]
NGR_b20880
Transcription factors [BR:
rhi03000
]
Prokaryotic type
Helix-turn-helix
XRE family
NGR_b20880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ScfRs
Peptidase_M78
HTH_3
HTH_31
HTH_19
HTH_26
HTH_25
Motif
Other DBs
NCBI-ProteinID:
ACP23534
UniProt:
C3KM98
LinkDB
All DBs
Position
pNGR234b:complement(2138428..2139846)
Genome browser
AA seq
472 aa
AA seq
DB search
MAIGKLYIGRKVRELREANRATQGQFAERIGISTSYLNQIENNQRPVSAAVLLALAEKFQ
IDIAELSSGEGDRLLSALSEALTDPLFETYAPNLQELKLITQNAPGLAHALIKCHQAYRR
NSEQLASIDDTIGRGASFVETTPYEEVRDFFHFVDNYIHDIDTLAERLAGELGLGEGDNH
AVLTRYLEQRHGVRVVRGAAGDESIRRYDPRSRILTLNPYAPAATRDFQLALQIAQLHAR
EEIDRVAGSAGFRTEEAYEICRIGLQNYFAGALILPYQAVLKTARELRHDIELVAARFGA
SLEQVCHRLSTLQRPGQKGVPIFFARIDRAGNITKRHSAAKLQFARFGAACPLWNVHQAF
EAPGRIIRQLAETPDGVRYLCLATQITKGGGGYRAAHPRYALALGCEISYADAFVYADDM
DLGNRAAFDPIGISCRICERTKCASRAVPPLKRKLIVDHDMRGSLPYRLSES
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcggcaagctctatatcggccgcaaggtcagggaactcagggaagcaaaccgg
gcgacacagggccagttcgccgaacggatcggcatctcgacgagctacctcaaccagatc
gagaacaaccagcgcccggtctccgcggcggtgctgctggcgctggcggagaagttccag
atcgacatcgccgagctctcctcgggggagggtgaccggctgctttcggccctctcggag
gcgctcaccgacccgctcttcgagacctatgcgccgaacctccaggaactcaagctcata
acccagaatgcgccgggcctggcgcatgcgctgatcaagtgccaccaggcctatcgccgc
aacagcgaacagctcgccagcatcgacgacacgatcggccgcggcgcctccttcgtcgag
acgactccctacgaggaggtgcgcgacttcttccatttcgtcgataactacattcacgac
atcgacacgctggccgagcgactcgcgggcgaactcggccttggcgagggcgacaaccac
gctgtgctgacgcgttatctcgaacagcggcacggcgtgcgcgtcgtgcggggtgcggcc
ggcgacgagtcgatccgccgctacgatccgcgctcccggatcttgaccctgaacccttac
gccccggccgcgacccgcgacttccagctggcgctgcagattgcccagcttcatgcgcga
gaggagatcgatcgcgtcgccggcagcgccggcttccgcaccgaggaggcctacgaaatt
tgtcggatcggcctgcagaattattttgccggggcgctgatcctcccttaccaggccgtt
ctcaagacggcgcgcgaattacgccacgacatcgaactcgtcgccgcccgcttcggcgct
tcgctggagcaggtctgccatcgcctgtcgacgctgcagcggccggggcagaagggcgtg
ccgatcttcttcgcccgcatcgaccgggccggcaacatcaccaagcggcacagcgccgcc
aagctgcaattcgcccggttcggcgctgcctgtcctctctggaacgtccaccaggccttc
gaggcgccgggccggatcatccggcagcttgccgaaacgccggacggcgtccgctatctc
tgtctcgccacccagatcaccaagggcggcggcggctaccgcgccgcccatccgcgctat
gccctggcgctcggctgcgagatctcctacgccgacgccttcgtctatgcggacgacatg
gacctcggcaaccgcgccgccttcgacccgatcggcatctcctgccgcatctgcgagcgc
accaaatgtgccagccgcgccgtgccgccgctgaagcgcaagctgatcgtcgaccatgac
atgcgcggctctctgccgtatcgtttgagcgagagctga
DBGET
integrated database retrieval system
