Sinorhizobium fredii NGR234: NGR_b21250
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Entry
NGR_b21250 CDS
T00888
Name
(GenBank) transcriptional regulator, LysR family
KO
K02623
LysR family transcriptional regulator, pca operon transcriptional activator
Organism
rhi
Sinorhizobium fredii NGR234
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rhi03000
]
NGR_b21250
Transcription factors [BR:
rhi03000
]
Prokaryotic type
Helix-turn-helix
LysR family
NGR_b21250
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
SBP_bac_3
OpuAC
SBP_bac_11
HTH_20
Motif
Other DBs
NCBI-ProteinID:
ACP23570
UniProt:
C3KMF5
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All DBs
Position
pNGR234b:2178168..2179094
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AA seq
308 aa
AA seq
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MIDARIKFRHLQTFVEVARQKSVVKAADLLNVTQPAVTKTIRELEEVLGVSVFERDGRGI
KITRYGEVFLRHAGAALTALRQGLDSVSQERSGDGPPIRIGALPTVSTRIMPRAMALFLE
EKTGARIKIVTGENAVLLEQLRVGDLDLVVGRLAAPDRMTGFSFEHLYSEQVVFAVRAGH
PLLSGKQSVFAHLGDYPVLMPTRASIIRPFVERYLIANGIAGLPNQIETVSDSFGRAFVR
SSDAIWIISNGVVATDIEDGLLAALPIDTSETKGPVGLTMRTDAIPSLPLSILMQTIREA
AGAAMAKS
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacgcgcgcatcaagtttcgtcatctgcagacatttgtcgaggtcgcgcgtcag
aagagcgtcgtgaaggccgccgacctgctgaatgtcacgcagccggcggtcaccaagacg
atccgcgagctggaggaggttttgggcgtctcggtcttcgagcgcgacgggcgcggcatc
aagatcacccgctacggcgaagtcttcctgcgccacgccggcgcggcgctgactgcgctt
cgccagggcctcgattccgtttcgcaggaacgctccggcgacgggccgccgatccgtatc
ggggcactgccgacggtctcgacgcgcatcatgccgcgcgccatggcgcttttcctcgag
gagaagaccggcgcccggatcaagatcgtcaccggcgagaatgcggtgctcttggaacag
cttcgcgtcggcgatctcgacctcgtcgtcggcaggctcgccgcgcccgaccgcatgacc
ggcttctccttcgagcacctctattccgagcaagtggtcttcgccgtgcgcgccggccac
ccgctgctgtccggcaagcagtcggtgttcgcgcatctgggcgactatccggtgctgatg
ccgacgcgagcctcgatcatccgccccttcgtcgagcgctacctgatcgccaacggcatt
gccggcctgccgaaccagatcgagaccgtctccgattccttcggccgcgccttcgtccgt
tcgagcgacgccatctggatcatctcgaacggcgtcgtcgccaccgacatcgaggacgga
ctgctggccgccctgccgatcgataccagcgagacgaagggaccggtcggcctcaccatg
cgcaccgacgcgatcccgtcgctgccgctgtcgatcctgatgcagaccatccgcgaggcg
gcgggggctgcgatggcgaaatcctag
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