Sinorhizobium fredii NGR234: NGR_b21890
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Entry
NGR_b21890 CDS
T00888
Symbol
dctD
Name
(GenBank) DctD, C4-dicarboxylate transport transcriptional regulatory protein
KO
K10126
two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NGR_b21890 (dctD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
rhi02022
]
NGR_b21890 (dctD)
Two-component system [BR:
rhi02022
]
NtrC family
DctB-DctD (C4-dicarboxylate transport)
NGR_b21890 (dctD)
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GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_5
HTH_8
FleQ
AAA_2
AAA_16
AAA
Mg_chelatase
RTP1_C2
OKR_DC_1_N
Zeta_toxin
T2SSE
Motif
Other DBs
NCBI-ProteinID:
ACP23634
UniProt:
C3KML9
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Position
pNGR234b:2249568..2250929
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AA seq
453 aa
AA seq
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MSGSVFLVDDDRDLRKAMQQTLELAGFTVSSFASAAEALAALTADFSGVVISDIRMPGMD
GLALFRKIAELDADLPVILVTGHGDIPMAVQAIQDGVYDFIAKPFAADRLVQSARRAQEK
RRLVTENRALRQAAEAASESLPLIGQTPVMERLRQTLRHIADTDVDVLVAGETGSGKEVV
ATLLHQWSRRRSGNFVALNCGALPETVIESELFGHEAGAFTGAVKKRIGRIEHASGGTLF
LDEIEAMPPATQVKMLRVLEAREITPLGTNTIRPVDIRVVAAAKIDLGDPAERGDFREDL
YYRLNVVTLSIPPLRERREDIPLLFSHFLKRAAARFGREVPEISAATRDHLMSHAWPGNV
RELSHFAERVALGVEGNPGKPAARPGTTSTGTLPERLERYEADILKEALTAHRGDVKETL
TALGIPRKTFYDKLQRHGINRVDYAGRTAAEES
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgagcggttccgtattcctggtcgatgacgaccgcgacctgcgcaaggcgatgcagcaa
acattggagctcgccggtttcaccgtgtcttcgtttgccagcgcggccgaggcgctcgcg
gcgctcaccgccgatttcagcggcgtcgtcatcagcgacatccgcatgccggggatggac
gggcttgccctgttccgtaagatcgccgagctcgatgcggaccttcccgttattctggtc
accgggcatggcgacataccgatggctgtccaggccatccaggacggcgtctacgacttc
atcgccaagccctttgccgccgaccggctcgtccagagcgcccgtcgagcgcaagagaag
cgtcgcctcgtcacggagaaccgggcgcttcgccaggcggccgaggccgcctcggaaagc
ctgccgttgatcggccagacgccggtgatggagcggctgcggcagacgctcaggcatatc
gccgacacggacgtcgacgtgctggtcgccggcgagaccggcagcggcaaggaggtcgtg
gcgacgcttctgcaccagtggagccggcgacggagcggcaatttcgtggcgctgaattgc
ggggcgctgcccgagactgtgatcgagagcgagctcttcggccacgaggccggcgccttc
accggtgcggtcaagaagcgcatcggccggatcgagcacgcgagcggcggcacgctgttc
ctcgacgagatcgaagcgatgccgccggcgacccaggtcaagatgctgcgcgtgctggag
gcccgcgagatcacgccgctcggcaccaatacaatccggccggtcgacatccgcgtcgtc
gctgccgccaagatcgacctcggcgatccggccgagcgcggcgacttccgcgaggatctc
tattaccggctcaatgtcgtcaccctgtcgatcccgcccctgcgcgagcgccgcgaggac
atcccgctgctcttttcgcatttcctgaaacgcgccgcggcgcgcttcggacgggaggtc
cccgagatctccgcggccacccgcgaccacctgatgtcgcacgcttggccgggaaatgtg
cgcgaactctcgcattttgccgagcgggtcgcactcggggtcgaaggtaatcccggcaag
ccggccgcccggccagggacgacaagcaccgggactttgccggagcggctggagcgctac
gaggccgatatcctgaaagaggcgctgaccgcccatcgcggcgacgtcaaggaaaccctg
acggcgctcggcattccccgcaagaccttctacgacaagctgcagcgccacgggatcaac
cgggtggactatgccgggcgcaccgccgcggaggagtcttga
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