Sinorhizobium fredii NGR234: NGR_b22310
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Entry
NGR_b22310 CDS
T00888
Name
(GenBank) putative transcriptional regulator, LacI family
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
rhi
Sinorhizobium fredii NGR234
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rhi03000
]
NGR_b22310
Transcription factors [BR:
rhi03000
]
Prokaryotic type
Helix-turn-helix
LacI family
NGR_b22310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
DUF218
HTH_Tnp_ISL3
Peripla_BP_6
HTH_3
HTH_24
HTH_23
B12-binding
MarR_2
HTH_Crp_2
HTH_AraC
TetR_N
HTH_7
Motif
Other DBs
NCBI-ProteinID:
ACP23676
UniProt:
C3KMR1
LinkDB
All DBs
Position
pNGR234b:2294425..2295498
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AA seq
357 aa
AA seq
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MHSVDNPGVLGLVTITWMPMHNYRKPPTMADVARRTGVSPMTVSRAFKRDSSVSQETREA
VLSAAEELGYVFDSTASNLRSQRTDFIAVTIPSINNANFADTVRALSDRVSERGLQILLG
YTNYDVAEEERLIEQLLRRKPEAIVVTGGKHTPRARKLLSNAGIPVIETWDLPEEPIGHV
VGFSNALAVREMVDHFVSVGYRKIAFIGGDADRDTRGTDRRAGFIAALKDHGIDAPRLIA
AGPPPISMREGANAMGQLLERFPDTEAVICVSDLSAFGALTECQRRGIAVPDRIAIGGFG
DYEIGAISVPSLTTINAFASEIGAKTAELILDVLDGKLDQPGRVTIRPDLILRQTSR
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
ttgcattccgtcgacaatccgggtgtacttggattggtaacgataacatggatgccgatg
cacaattatcgcaagcccccgaccatggccgacgtggcgcggcgaaccggcgtttcgccg
atgaccgtttcgcgcgccttcaagcgtgacagctcggtcagccaggagacccgcgaggcg
gtgctcagcgctgccgaggagctcggctacgtcttcgacagcaccgcttccaatctccgc
tcgcagcgcaccgacttcatcgcggtgaccataccgtcgatcaacaacgccaacttcgcc
gatacggtgcgggcgctttccgaccgcgtctcggaacgcggcctgcagatcctgctcggt
tacacgaattacgatgtcgcggaagaggagcggctgatcgagcagcttctgcggcgcaag
cccgaagcgatcgtcgtgacgggcggcaagcacacgccgcgggcccgaaagctcttgtcg
aatgccggcatcccggtcatcgaaacctgggacctgcccgaggagccgatcggccatgtc
gtcggcttctcgaacgcgctcgcggtgcgcgagatggtggatcacttcgtcagcgtcggc
taccgcaagatcgccttcatcggcggcgacgccgaccgcgatacgcgcggtaccgatcgc
cgggcaggcttcatcgccgccctcaaggatcacggaatcgatgcgccgcgcctgatcgcc
gccgggccgccgccgatctcgatgcgcgagggggcgaacgccatggggcagttgctcgag
cgctttcccgatacggaagcggtgatctgcgtctccgacctttccgccttcggggcgctg
accgaatgccagcggcgcggcatcgccgtgcccgacaggatcgccatcggcggcttcggt
gattacgagatcggcgcgatctcggtgccaagcctgacgacgatcaacgcctttgccagc
gagatcggcgcgaagacggcggaactgatcctcgacgtgctcgatggcaagctcgaccag
ccgggccgggtgacgatccggcccgacctgattttgcggcagaccagccggtag
DBGET
integrated database retrieval system
