Sinorhizobium fredii NGR234: NGR_c00410
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Entry
NGR_c00410 CDS
T00888
Symbol
miaB
Name
(GenBank) putative tRNA-i(6)A37 modification enzyme MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
rhi
Sinorhizobium fredii NGR234
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhi03016
]
NGR_c00410 (miaB)
Enzymes [BR:
rhi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
NGR_c00410 (miaB)
Transfer RNA biogenesis [BR:
rhi03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
NGR_c00410 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
ACP23845
UniProt:
C3MF08
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All DBs
Position
43154..44554
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AA seq
466 aa
AA seq
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MTQETALLPKSPRAGDEHVPARKVFVKTYGCQMNVYDSDRMSDALSRDGYVATDVLEDAD
FVLLNTCHIREKAAEKVYSELGRLRELKKAKASEGREMVIGVAGCVAQAEGNEILRRAPA
VDLVIGPQTYHRLPEALKRARSGERVVETDYAIEDKFEHLPAPDKAKTRSRGVTAFLTVQ
EGCDKFCTFCVVPYTRGAEVSRPVAQILAEAEKLVDGGVREITLLGQNVNAWHGAGPNGR
DWGLGDLLRRLGEIDGLARLRYTTSHPRDMDESLIEAHRSMAKLMPYLHLPVQSGSDRIL
KAMNRRHTAAEYLALVERIRAVQPDLALSGDFIVGFPGETEADFEETMRLVEVVGYAQAF
SFKYSTRPGTPGADLKDQVPEDVKAKRLERLQSLLVNQQRDFAAACVGREIDLLLEKPGR
MPGQLVGRSPWLQPVNVDAKRSQIGDIIKVRITKAGSNSLFAEMIE
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgacccaggaaaccgctcttctgccgaaatcgccccgggcgggcgacgaacacgttccg
gcccgcaaggtcttcgtcaagacctatggctgccagatgaatgtctacgattccgatcgc
atgtccgacgctctgtcgcgggacggctacgttgcgacggacgtgctggaagatgccgac
ttcgtcctgctcaacacctgtcatatccgcgaaaaggccgccgaaaaggtctattccgag
ctcggccgcctgcgcgagctgaagaaggcgaaggcgagcgagggccgcgaaatggtgatc
ggcgtcgccggctgcgtcgcccaggccgaaggcaatgaaatcctgcggcgcgctccggcc
gtcgatctcgtcatcggcccgcaaacctaccatcggctgccggaagccttgaagcgtgca
aggagcggcgagcgggtcgtcgagacggattacgccatcgaggacaagttcgagcatctg
ccggcaccggacaaggcgaagacccgttcgcgcggggtaacagccttcctcaccgtgcag
gaggggtgcgacaagttctgcaccttctgcgtggtgccctacacccgcggcgccgaggtc
tcgcggccggtggcgcagatcctcgccgaggcggaaaagctggtcgacggcggcgtgcgc
gagatcacgctgctcggccagaacgtcaatgcctggcacggggcggggcccaacggccgc
gattggggccttggagatctgttgcgccgtctcggcgagatcgacggcctcgcgcgcctg
cgctacaccaccagccacccgcgcgacatggacgagagcctgatcgaggcgcaccggtcg
atggccaagctgatgccctatctgcatctgccggtccagtccggctccgatcgcatcctg
aaggcgatgaaccggcgccatacggcggccgaatatctcgcccttgtcgaaaggatccgt
gccgtccagcctgatctggcactttccggcgatttcatcgtcggcttccccggcgagacc
gaggcggatttcgaggagacgatgcgcctcgtcgaggtggtcggttatgcacaggcattc
tccttcaaatattcgacccgtcccggtacgccgggcgccgatctaaaggatcaggttccc
gaagacgtgaaagccaagcgactggaaagattgcagagtttgcttgtcaaccagcagcga
gactttgccgccgcctgcgtcgggagggaaatcgatctgctgctggagaagcccggccgc
atgcccggccagctggtcggccgctcgccttggctgcagcccgtgaatgttgatgcaaaa
cgatcgcaaatcggtgacattatcaaggtacgaatcaccaaggccggctcgaacagcctg
tttgccgagatgatcgaataa
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