Sinorhizobium fredii NGR234: NGR_c01180
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Entry
NGR_c01180 CDS
T00888
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid-CoA-ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi00061
Fatty acid biosynthesis
rhi00071
Fatty acid degradation
rhi01100
Metabolic pathways
rhi01212
Fatty acid metabolism
rhi02024
Quorum sensing
rhi04146
Peroxisome
Module
rhi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
NGR_c01180 (fadD)
00071 Fatty acid degradation
NGR_c01180 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
NGR_c01180 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
NGR_c01180 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rhi01004
]
NGR_c01180 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhi04147
]
NGR_c01180 (fadD)
Enzymes [BR:
rhi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
NGR_c01180 (fadD)
Lipid biosynthesis proteins [BR:
rhi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
NGR_c01180 (fadD)
Exosome [BR:
rhi04147
]
Exosomal proteins
Exosomal proteins of breast milk
NGR_c01180 (fadD)
Exosomal proteins of breast cancer cells
NGR_c01180 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
ACP23921
UniProt:
C3MF84
LinkDB
All DBs
Position
complement(126754..128454)
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AA seq
566 aa
AA seq
DB search
MAEASMQQAGSGAAKNWVKSYPPGVPAEIGPLPYRSLGEFFDHAVAQHSWRPAFTCMGKS
LTFADLNVQSGRIGAWLQSLGLAKGDRVAVMMPNILQNPVIVYGILRAGYTVVNVNPLYT
PRELEHQLVDAGAKAIFVLENFAHTVEQVVARTKVKHVVVATMGDMLGVKGLLVNLVVRR
VKKLVPAWSLPGHVSFRSVLAKGEKLQLAKPNVGPGDVAFLQYTGGTTGVSKGATLTHAN
LLSNMAQMELWLNTAFLRKPRPDNLTFMCALPLYHIFALTVNSLMGLATGGNNILIPNPR
DIPAFVAELGKYKTNIFPGLNTLFNALMNNPEFQKLDFASLILTFGGGMAVQRPVAERWL
AMTHCPIHEGYGLSETSPVATANRLDTDEFTGTIGMPLPSTEVEIRDENGNSLPTGEIGE
ICIRGPQVMAGYWQRPDETAKAISPDGFFRTGDIGFMNAAGLTKIVDRKKDMILVSGFNV
FPNEIEEVVATHPGILECAAIGIADPHSGEAVKLFVVRKDPNLTEEDVKRHCAENLTNYK
RPRHVEFRDELPKSNVGKILRKDLRG
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagcaagcatgcagcaggcggggtccggcgcggcgaaaaactgggtcaaatcc
tatccgccgggcgtgcccgccgaaatcggaccgctcccctaccgatcgctcggcgagttc
ttcgaccatgcggtggcgcagcattcctggcgccccgccttcacctgcatgggcaagtcg
ctcaccttcgccgatctcaatgtccagtcgggtcgaatcggcgcctggctgcagtcgctc
ggtctggcgaagggcgatcgcgtcgccgtcatgatgccgaacatcctgcagaacccggtg
atcgtctacggcatcctcagggccggctacacggtcgtcaacgtcaacccgctctacacg
ccgcgcgagctcgaacaccagctggtcgatgccggcgccaaggcgatcttcgtactcgaa
aatttcgcccatacggtcgagcaggtcgtcgcccggaccaaggtcaagcacgtggtggtc
gcgacgatgggcgacatgctcggggtgaagggcctcctcgtcaatctcgtcgtgcgccgc
gtaaagaagctcgttcccgcctggtcgctgccgggccacgtctccttccgctcggttctt
gccaagggcgagaagcttcagcttgcgaagccgaatgtcggacccggcgatgtcgccttc
ctgcaatataccggcggcacgaccggcgtttccaagggcgccaccctcacccatgccaat
ctgctgtccaacatggcgcagatggagctctggctgaacacggcgttcctgcgcaagccg
cgcccggacaacctcaccttcatgtgcgccttgccgctctatcatatcttcgcgctgacg
gtgaattcgctgatggggcttgcgaccggcggcaacaacatcctgatccccaatccgcgc
gacattcccgccttcgtcgcggaactgggcaagtacaagaccaacatcttcccgggtctc
aacacgctgttcaacgcgctgatgaacaatccggagtttcagaagctcgattttgcctcg
ctgatcctgaccttcggcggcggcatggcggtgcagcgaccggtggcggaacgctggctt
gccatgacgcactgcccgatccatgaaggctacgggctctcggaaacctctccggtcgcc
accgccaaccggctcgacactgacgagttcaccggcacgatcggcatgccgctgccctcg
accgaggtcgaaatccgcgacgaaaacggcaatagcctgccgaccggcgaaatcggcgag
atctgcatccgcggcccgcaggtcatggccggctactggcagcgccccgacgagacggcc
aaggcgatttctcccgacggtttcttccgcaccggcgacatcggcttcatgaatgccgcc
gggctgacgaagatcgtcgaccgcaagaaggacatgatcctcgtttccggcttcaacgtc
ttcccgaacgagatcgaggaggtcgtggcgacccaccccggcatcctggaatgcgcggcg
atcggcatcgccgatccgcattccggcgaggcggtcaagctcttcgtggtgcgcaaggat
ccgaacctcaccgaagaggacgtcaagcgccattgcgccgaaaacctcaccaactacaag
cgaccgagacatgtggagttccgcgacgaactgccgaagtcgaacgtcggcaagattttg
cggaaggacctgcggggctga
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